Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00570 ATGGTTGGAAGTGGCCATTTGGGCGCCAATGGAACAGTTGAACCATTGCCCGAGGATTTTGATGCGTCAGCTGTGATCAAAGAACCTGTGCCACCCACAGTTGCAGAAAGTGAGAACGTGAAAAGAGCTATAGTACTGGGAAAAAATGTTCACACACTGTGTCTAGAAGTTACAGAACCTGATGCAGATGATGAGATTACTGGGGAAAGGGATGCTTACATGGCAAGTGTATTGTCCAAATACAAAAAATCATTGACTGAAAGGACAAAACATCATTTAGGTTACCCCTATAATTTGGATTTCGACTACGGTGCACTCTCTCAACTTCAGCACTTCTCCATAAACAACCTGGGAGATCCATTCATTGAAAGCAATTATGGAGTCCACTCCCGGCAGTTTGAAGTTGGTGTTTTGGACTGGTTTGCCCGGTTATGGGAAATAGAGAAAGATGAGTACTGGGGCTATATGACAAACTGTGGTACTGAGGGCAATCTCCATGGCATCCTAGTTGGGAGAGAGGTCCTTCCGGATGGGATTTTGTACGCCTCACAAGAATCACATTATTCTGTATTTAAAGCTGCACGTATGTACAGAATGGATTGTGTGAAGATTGCAACTCTTCATACCGGAGAGATTGATTGTAATGATTTCAAGGCCAAGCTGCTTCTTCACAAAGATAAGCCAGCTATTGTAAATGTGAACATAGGTACAACTGTCAAAGGAGCAGTGGATGATCTTGATCTGGTGATAAAGACACTTGAAGATACTGGATTTTCACGTGACAAATTCTACATCCATTGTGATGGGGCCTTGTTTGGTCTCATGATGCCTTTTGTGAAACTTGCACCAAAAGTTTCTTTTAAGAAGCCTATTGGTAGTGTTAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCAATGCCTTGTGGTGTTCAGATAACAAGATTGGAGCATATCAATGTTCTTTCCAATAATGTAGAATACCTTGCTTCTAGGGATGCCACAATCATGGGTAGCCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCCTTAACCGGAAAGGATACAGAGGTTTCCAGAAAGAAGTGCAGAAATGCCTGAGGAATGCACACTACTTCAAGGACCGCCTTAGGGAGGCTGGAGTTGGTGCAATGCTTAATGAGCTGAGCAGCACAGTTGTGTTTGAGAGGCCACATGATGAGGAGTTTGTACGGAAGTGGCAGTTGGCATGCCAGGGAAACATAGCACATGTGGTGGTGATGCCAAATGTCACTAAGGGCAAGCTTGATGATTTTCTGAACGAGCTTGTGGAGAAGCGTGCTCAATGGTTCAAAGATGACAAGTTTCAACAATATTGCATTGCCTCAGAAGTGGGTGAAACCTGTTGTCTTTGCCCTTTGCATAAGGGCAAGTGA 1416 0.4393 MVGSGHLGANGTVEPLPEDFDASAVIKEPVPPTVAESENVKRAIVLGKNVHTLCLEVTEPDADDEITGERDAYMASVLSKYKKSLTERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKDEYWGYMTNCGTEGNLHGILVGREVLPDGILYASQESHYSVFKAARMYRMDCVKIATLHTGEIDCNDFKAKLLLHKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEDTGFSRDKFYIHCDGALFGLMMPFVKLAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINVLSNNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKDRLREAGVGAMLNELSSTVVFERPHDEEFVRKWQLACQGNIAHVVVMPNVTKGKLDDFLNELVEKRAQWFKDDKFQQYCIASEVGETCCLCPLHKGK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00570 471 Pfam Pyridoxal-dependent decarboxylase conserved domain 179 392 IPR002129 GO:0016830|GO:0019752|GO:0030170
Adu10g00570 471 Gene3D Aspartate Aminotransferase, domain 1 352 440 IPR015422 GO:0003824
Adu10g00570 471 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 293 314 IPR021115 GO:0016831
Adu10g00570 471 Gene3D - 107 351 IPR015421 GO:0003824
Adu10g00570 471 PANTHER SERINE DECARBOXYLASE 7 469 - -
Adu10g00570 471 SUPERFAMILY PLP-dependent transferases 87 443 IPR015424 -
Adu10g00570 471 PANTHER - 7 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00570 Adu-Chr10 6494596 6498077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00570 K25193 - gmx:100785163 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04231 03 131317500 131319277 Adu10g00570 10 6494596 6498077 PCT