Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00569 ATGGAGCCCCTCCGACTGGAGAAACGAACAAAGCCGCTCTGGAAACCCTCCAAGACACGGGAAATCCCTTCAAATCACGTTTTGGAGTGTTCATCGCAGAAGAAAACTAGGGATTTGCCGAACTTGACCGAATGCCATGCGTGCGGATTCAAGTTCGACGTTTGCACCGTGCACCAGAACTGTTTCTTGAAATACAGAAATGCTGCACCATGGTCTTATTCCTGTATAGGTTCTGAATTTTCTGTTTGTGTGGATTGTTGGATTCCCAAACCAGTGGCAATTTCTAGAAGTAGAAGAAAGGTTAAGGGTGGAGTGATCAAGAAAAAGGCTAGGGTTATAGTAGAGAAGGTGAATTCTAATTCAAGGGTTTTGGGAGGTGGGGATTTGGTGAGATCTATGGAGGATGTGGTTAAGGATGCAAATCATGATATGGAAAAGAAGGCTGATGCAGCTGCTAAGGCCAGAGAGGAGGCGGTAAAGAAAGTTGTGGTGGCTAGAAGGGCTGTTGAAGTGGCAAATAATGCTTTGAGCTTGGTACCGAACAGAGAAGAGAGTGGTCTTAAGGTTGATGATGTAAAGTTTGTTGATGGTTCAGTGATGACGTCTGAGTTGCGTTTGAATAGCTCATCGAAGACTTCAAAGAGACAATGCTTAATGAATACAAGTTGCTTGGATACTCCCAAGACATGGGATTCAAGTCTTGATTCATCATTGAAGAGATTGGATTCATGGGATGCTAGTGGTTATGAACCTTCTATTTCTGTAGGATCTTTGGATGGTGGTTCTTCAAATGACCTGAATCGTCGCTGCATTGGCACAAGTGACATGAAAACTTGCGCAAATGATGGTGGACGCACAGCTGAAATCAATGCTGAAGAGATTGAGGATGAGGTCTTGAATGAAGGTGAGGGAAGTTGTTCTTTTCGGTTGATAAACCATGGAGGAGAAGACAGTGGGTTAGAATCTGATCGCAAGCAAGCAGATCCTGCATTGTGTGGGGATGAAAGATGTAATGGAAAGCCTGATCGCTATTTCTTGAAGTATATGAGGAGAAGGTGTAGCACCTTCCTGGAAGTTAAGGGAACAGTGTACAGGTGGGAAATTAGTTGGACAAGAGTCACAGACTGGAGACGAATGCAATATTCTGAAAATCATGTCATTTTGACTGAGTTCCTTAACAATGGTGGCTGGGAATTTTTTGGTAGTTCTGTAATTTCTAGCAGTTGCTTTAGATCATTGGTCCGACTGAATAGATTGGTTAAGTTTGTGGATTTGCTTGGCCTCGTTTGTGTAGCTTCTTACCCTATGCAAGCATGCAGCGATCAGCGATGTGTGGAATCATGTAGGTCCTTTTCTTTAAGGCCAAGGGCTTGCAACGCGCTTCTTCACGCCCTCGTCAACACCCACAGATTTGATTCACTATGGGAGGTCTATGGGGACATGGTGTCGCGTGGATTCTCTCCTACCGTTGTGAGCTACGGTATTTTGATGCAGTGCTGCTGCAGCCAAGCTGATTTTGTTGGTGTACGCAAGCTATTTGATGAAATGCGCCACCGCAAAATTAAACCAACCGTTGTGGTTTACACTATTATGATCCGTGTTCTTTTCAACGAGGGTCGAATAGGAGATGCCGAGGGCGTCTTCCGTTTGATGAGGGAATCCGGAGTGGTGCCTAATTTGTACACTTATAAGACTCTCATGGATTCTGGCAAGATAGCTAATGTGATCCGGGTTTTCGAGTTGTATGCCGAAATGCTTTGGCATGGATTGCACCCTAATGTTGTCACATTTACTACTATGATAGATATTCTGTGCAAGgtggtacttttgtcagcattctcaaaattcatggGCAAAAGTAGCAATCAAGAATTGAAGAATCTATATATTGTGAGATATCTCATTTCAAAATCTGCTTCACTAACCTGTGCGATGGCTTCATTTGTACCCTCTGATATGGTTTCAACCAACCATAACAATGGTGGAGTTTTAGTTGTTGCAATCAACAACAAAGAGGAGAAGGAACAGCAACAACAAATGATGAGTGAAGAAAAAGAAGAAGAAGAAGAAAAGAAGATTGACTACTCGCAAAGAGCACAGTGGCTTCGTGCCGGTGTAATGGGAGCCACGGACGGATTAGTATCAGTGGCTTCGTTAATGATGGGAGTGGGAGCGGTTCGAACCGACGCAAAAGCAATGCTTCTTGCTGGTTTTGCAGGATCAGTTGCAGGAGGTTGTAGCATGGCAATAGGTGAGTTTGTTTCTGTGTACACACAGTATGAAGTCGAAGTTGCTCAAATCAAGAACAAAACAATTTGTGAAGACGTGCAAATGGTTAAGAAAGCGTTACCTAATCCATTGCAAGCTGCATTGGCATCTGCATCGTGTTATTGTTTAGGTGCGGTTCCTCCTTTGGTGGGAGCAGCGTTTATTAGAGACTACCGTACAAGGATTATGGTGGTTTTGGCGGTGGCTACTCTCTCTTTGTTTGTGTTTGGTTGGATTGGGTCTGTGCTTGGAAACACACCAATGCTTAGAGGTGTCAGCAGAAAGTTGCAAAGTGATAGGAAGAGAAACACGTGTCCTGAAGCTGAGTCCATTGTCCATGGTGTAGTGAGAGACGCCGTTGCCTCTGACCCCAACATGGCGGCGGCCTTGCTGAGGCTTCACTTCCATGACTGCTTTGTTGagggatgcgacgcttccattctcatcgacgtgtcatcacagccggagaagcttgcatttgctcatcaaggcctcagaggctttgaggtcattcaaagagccaaggctcaattggaagcttcttgccctgcccttgtttcttgtgctgacattctcgctttggctgccAGAGACGCCATTGCTCTGACCAATGGACCAACATATCAAGTTCCAACTGGGCGCAGAGATGGTTTCGTTTCCAATTTTAGCCTTGCAGATGAAATGCCTCAAGTTACTGATTCTATTCAGATACTCAAGGCCAAGTTCCTCAACAAGGGTCTCACCCACAAAGACCTTGTTCTTCTCTCTGCTGCACATACAATTGGAACAACAGCATGCTTCTTCATGACAAAAAGGCTATACAACTTCTTCCCGGGTGGTGTGGGATCAGACCCAGCTATCAACCCAAACTTCCTCCCAAGGCTGAAGGCTAGGTGCCCTCAAAACGGCGATGTTAACGCTCGCCTCGCCATCGATGAAGGCAGTGGGACGGAATTTGACAAACACATTCTGAAGAACATAAGGGAAGGTTTTGCTGTCTTAGAATCTGATGCTAGGCTTAATGATGATATATTCACCAAGAGTGTTATGGATTCCTACTTTAGTCCCCTTAATCCAATTTTTGGACCTTCTTTTGAAGCTGATTTTGTTGAGTCTATTGTGAAAATGGGCCAAATTGGTGTCAAGACTGGTTTTCTTGGAGAGGTTAGGCGAGTTTGCTCAAGATTCAATTCATGA 3465 0.4179 MEPLRLEKRTKPLWKPSKTREIPSNHVLECSSQKKTRDLPNLTECHACGFKFDVCTVHQNCFLKYRNAAPWSYSCIGSEFSVCVDCWIPKPVAISRSRRKVKGGVIKKKARVIVEKVNSNSRVLGGGDLVRSMEDVVKDANHDMEKKADAAAKAREEAVKKVVVARRAVEVANNALSLVPNREESGLKVDDVKFVDGSVMTSELRLNSSSKTSKRQCLMNTSCLDTPKTWDSSLDSSLKRLDSWDASGYEPSISVGSLDGGSSNDLNRRCIGTSDMKTCANDGGRTAEINAEEIEDEVLNEGEGSCSFRLINHGGEDSGLESDRKQADPALCGDERCNGKPDRYFLKYMRRRCSTFLEVKGTVYRWEISWTRVTDWRRMQYSENHVILTEFLNNGGWEFFGSSVISSSCFRSLVRLNRLVKFVDLLGLVCVASYPMQACSDQRCVESCRSFSLRPRACNALLHALVNTHRFDSLWEVYGDMVSRGFSPTVVSYGILMQCCCSQADFVGVRKLFDEMRHRKIKPTVVVYTIMIRVLFNEGRIGDAEGVFRLMRESGVVPNLYTYKTLMDSGKIANVIRVFELYAEMLWHGLHPNVVTFTTMIDILCKVVLLSAFSKFMGKSSNQELKNLYIVRYLISKSASLTCAMASFVPSDMVSTNHNNGGVLVVAINNKEEKEQQQQMMSEEKEEEEEKKIDYSQRAQWLRAGVMGATDGLVSVASLMMGVGAVRTDAKAMLLAGFAGSVAGGCSMAIGEFVSVYTQYEVEVAQIKNKTICEDVQMVKKALPNPLQAALASASCYCLGAVPPLVGAAFIRDYRTRIMVVLAVATLSLFVFGWIGSVLGNTPMLRGVSRKLQSDRKRNTCPEAESIVHGVVRDAVASDPNMAAALLRLHFHDCFVEGCDASILIDVSSQPEKLAFAHQGLRGFEVIQRAKAQLEASCPALVSCADILALAARDAIALTNGPTYQVPTGRRDGFVSNFSLADEMPQVTDSIQILKAKFLNKGLTHKDLVLLSAAHTIGTTACFFMTKRLYNFFPGGVGSDPAINPNFLPRLKARCPQNGDVNARLAIDEGSGTEFDKHILKNIREGFAVLESDARLNDDIFTKSVMDSYFSPLNPIFGPSFEADFVESIVKMGQIGVKTGFLGEVRRVCSRFNS 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00569 1154 CDD Nodulin-21 700 843 - -
Adu10g00569 1154 Gene3D Tetratricopeptide repeat domain 405 517 IPR011990 GO:0005515
Adu10g00569 1154 Gene3D Tetratricopeptide repeat domain 518 586 IPR011990 GO:0005515
Adu10g00569 1154 PRINTS Haem peroxidase superfamily signature 883 897 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Haem peroxidase superfamily signature 960 972 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Haem peroxidase superfamily signature 1007 1022 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Haem peroxidase superfamily signature 942 959 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 Coils Coil 667 694 - -
Adu10g00569 1154 PANTHER PEROXIDASE 850 1151 - -
Adu10g00569 1154 Gene3D Peroxidase, domain 2 985 1132 - -
Adu10g00569 1154 TIGRFAM PPR: pentatricopeptide repeat domain 491 525 IPR002885 -
Adu10g00569 1154 TIGRFAM PPR: pentatricopeptide repeat domain 526 559 IPR002885 -
Adu10g00569 1154 TIGRFAM PPR: pentatricopeptide repeat domain 457 490 IPR002885 -
Adu10g00569 1154 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 454 488 IPR002885 -
Adu10g00569 1154 CDD secretory_peroxidase 851 1152 IPR033905 GO:0004601|GO:0042744
Adu10g00569 1154 Pfam VIT family 780 850 IPR008217 GO:0005384|GO:0030026
Adu10g00569 1154 Pfam VIT family 702 769 IPR008217 GO:0005384|GO:0030026
Adu10g00569 1154 Gene3D - 859 1153 - -
Adu10g00569 1154 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Adu10g00569 1154 Pfam Peroxidase 870 1109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 ProSitePatterns Peroxidases proximal heme-ligand signature. 1007 1017 IPR019793 -
Adu10g00569 1154 ProSiteProfiles Plant heme peroxidase family profile. 851 1153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 Coils Coil 137 161 - -
Adu10g00569 1154 Pfam PPR repeat family 457 502 IPR002885 -
Adu10g00569 1154 Pfam PPR repeat family 523 568 IPR002885 -
Adu10g00569 1154 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 524 558 IPR002885 -
Adu10g00569 1154 ProSitePatterns Peroxidases active site signature. 883 894 IPR019794 GO:0004601
Adu10g00569 1154 SUPERFAMILY Heme-dependent peroxidases 852 1153 IPR010255 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Plant peroxidase signature 885 905 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Plant peroxidase signature 1082 1099 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Plant peroxidase signature 1006 1018 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Plant peroxidase signature 922 935 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Plant peroxidase signature 861 880 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Plant peroxidase signature 960 975 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Plant peroxidase signature 941 951 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PRINTS Plant peroxidase signature 1127 1140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu10g00569 1154 PANTHER PEROXIDASE 25-RELATED 850 1151 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00569 Adu-Chr10 6439048 6447267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00569 851 1153 Peroxidase AT1G77100 52.787 5.94e-94 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00569 K00430 - aip:107623595 623.624