Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00564 ATGTTAGAGGGAGGAGGTAGGCCATCTGGGATGGTCTCAAAATTGAAGCTTGGAATGGCATTGAGAGCATTGGAGCCTCTGGATTTGAGGAGGCGCAAGTGGTTGAACTCTGTTGACAAAGGTTATGTGGAAGCCTTTGGTGTGAAGGATCTTTGCTGGACATATCGTTTTTCCTATCCTCATTTTTGCACTTTGAATAAGAGTAATGAAGACATAACTTACCTTGCTACATTTCGTGCTTCAAATCTTAGGGAATCGAAAATGAACGACCTAATGACCAAGTCATTCACGAGCTACGTGGATCTGAAGAAAGCGGCAATGAAAGACGAATTGGACTTGGAAGCAGGGCAGGGAGTGGAGCTGAGCTCTTCCACCACTCACATGGACACGGACATGGGCCTGTTCTTGGAGGAAGCCGAGAAGGTGAAGACGGAAATGGCGAGCCTCCGCGAGATACTCGAGAGGCTCCAACAGGCCAACGAGGAGGGAAAATCACTCCACAAGCCCGACGCTCTGAAATCTCTAAGGACAAGAATCAATTCCGACATTGTGACGCTTCTGAAGAAGGCCCGGGCCATTAGAGCCCATCTGGAAGACATGGACAAAGCCAACTCCGCAAACAGGAGGCTCTCGGGACTCAAGGACGGGACCACAACCGCCATCTACCGCACTCGGATCGCGGTCACGAACGGGCTCCGGAAGAAGCTGAAGGAGCTGATGATGGAGTTCCAGGGGCTGAGGCAGAGGATGATGACAGAGTACAAGGAGACTGTTGGAAGAAGGTACTTCACGGTGACCGGTGAGTACCCGGACGAAGAGGTGATCGAGAAGATCATTTCGAATGGCGAGGAAGAGGAGTTCTTGGGGAAGGCGATTGGGGAGCATGGGAGGGGGAAAGTGATGGAAACGGTGGTTGAGATTCAGGACAGGCACGATGCGGCGAAAGAGATCGAGAAGAGCTTGCTTGAGTTGCATCAGGTGTTCTTGGACATGGCGGTTATGGTGGAGGCTCAAGGGGAGAAGATGGATGACATTGAGCACCACGTGATCCATGCTTCTCACTATGTTAAGGATGCTAACAACGAACTTGTGAGCGCTAAAAAGTACCAGAGGAACAGTAGGAAGTGGCTCTGCATTGGGATCATTATTCTTCTCATCCTCATCCTTGTTATTGTCATTCCCATCGCCACCAGTTTCAGTAGCTCTTGA 1209 0.5037 MLEGGGRPSGMVSKLKLGMALRALEPLDLRRRKWLNSVDKGYVEAFGVKDLCWTYRFSYPHFCTLNKSNEDITYLATFRASNLRESKMNDLMTKSFTSYVDLKKAAMKDELDLEAGQGVELSSSTTHMDTDMGLFLEEAEKVKTEMASLREILERLQQANEEGKSLHKPDALKSLRTRINSDIVTLLKKARAIRAHLEDMDKANSANRRLSGLKDGTTTAIYRTRIAVTNGLRKKLKELMMEFQGLRQRMMTEYKETVGRRYFTVTGEYPDEEVIEKIISNGEEEEFLGKAIGEHGRGKVMETVVEIQDRHDAAKEIEKSLLELHQVFLDMAVMVEAQGEKMDDIEHHVIHASHYVKDANNELVSAKKYQRNSRKWLCIGIIILLILILVIVIPIATSFSSS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00564 402 SUPERFAMILY t-snare proteins 130 359 IPR010989 GO:0016020|GO:0016192
Adu10g00564 402 PANTHER SYNTAXIN-RELATED PROTEIN KNOLLE 92 395 - -
Adu10g00564 402 Pfam SNARE domain 341 392 IPR000727 -
Adu10g00564 402 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 304 366 IPR000727 -
Adu10g00564 402 SMART SynN_4 127 255 IPR006011 GO:0016020
Adu10g00564 402 CDD SynN 132 291 IPR006011 GO:0016020
Adu10g00564 402 CDD SNARE_syntaxin1-like 303 364 - -
Adu10g00564 402 SMART tSNARE_6 299 366 IPR000727 -
Adu10g00564 402 Coils Coil 136 166 - -
Adu10g00564 402 PANTHER SYNTAXIN 92 395 IPR045242 -
Adu10g00564 402 Pfam Syntaxin 135 339 IPR006011 GO:0016020
Adu10g00564 402 Coils Coil 229 249 - -
Adu10g00564 402 Gene3D - 127 258 - -
Adu10g00564 402 ProSitePatterns Syntaxin / epimorphin family signature. 310 350 IPR006012 GO:0005484|GO:0006886|GO:0016020
Adu10g00564 402 Gene3D - 299 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00564 Adu-Chr10 6379632 6382387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00564 88 402 SNARE and Associated Proteins AT1G08560 66.458 3.54e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00564 K08486 - gmx:100816016 494.967