Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00548 ATGAAGCCTTTAGAGACATTATTCACAATCTCAGATAACAACTCCTTAATGAGGAAATATAAGGGGAAAAGCAAAACAAGAAAATTTTGTCTATGCCTCCAATCAATCTTCCCTATCTTAGATTGGGGAAGATATTACACTATCCGAAACTTGAGAGGTGATTTCATTGCTGGACTCACCACTGCAAGTCTCTGCATTCCTCAGGATATTGCATATGCCAAGCTTGCAAATTTGGACCCTCACCATGCACTATACGCAAGCTTTGTGACACCTCTTGTGTATGCTGCCATGGGAAGCTCAAGAGACATTGCTATAGGACCTGCAGCTGTGGTCTCACTCTTGCTTGGAGCTATGCTTTCTCATGACATTAGAGACCACAAGAGCCATGAATATCTACGTCTTGCCTTCACTGCTACATTCTTTGCCGGAGTTACTCAGCTCGCACTCGGCGTTCTTAGGCTCGGTTTCTTGATAGACTTCTTATCTCATGCTGCCATTGTGGGATTCATGAGTGGAGCTGCCATTATTATTTCACTTCAACAGCTTAGAGGCCTCCTTGGCATACCACACTTTACTAAGAAAACTGATATTATTTCTGGCATTGGCTCAGTTAAGAACGCTATAGTGCACCATGAGTGGAATTTGGAGACAATTATCATTGGAACATCATGCTTGATCTTCCTTCTTATAACCAAGTACATTGGTAAAAAGCATAAGAAACTCTTCTGGGTAGCTGCAATTGCTCCTATGACTTGTGTTATAGTTTCCACCATTTGTGTCTACATTACAAGGGCTGATGAGAAAGGCGTATCAACTATTAACCACATCAAGGGAGGTCTTAACTCAGTTTCTGCTAATGAAATTTTCTTTAGAGGAAAATATGTTGTACGAGGTTTTCGGATTGGTGCTGTTGCTGGTATAGTAGCACTCACGGAAGCTGTATCAATTGGGAGAACATTTGCAGCCATGAAACATTATACACTGGATGGTAACAAGGAAATGGTTGCAATGGGAACCATGAACATTGTTGGTTCTTTGACATCTTGCTTTGTGGCCACAGGGTCTTTCTCTCGGTCAGCAGTGAACAACATGGCTGGTTGTGAAACTGCAGCATCAAACATAGTGTTGTCCATTGTTGTATTGTTAGTACTAACATTGTTTACACCTGTGTTTAAGTACACTCCAAATGCAGTGCTTTCTTCAATCATAATAGCAGCTACAACAAACTTGGTGAACATAAATGCAGTTATCATGATATGGAAGATTGACAAATTTGACTTCATGGCTTGCATGGGAGCCTTCTTTGGTGTCATATTCATGAATCTTGAATATGCCCTTATAATTGCGGTGTCAATATCTTTTGTGAAAATAGTGTTTAGAGTGACATGGCCAAAGGTTGTAGTACTTGGTAAAATTCCAGGTACTTCTATTTACAGGAACATTGAGCAATACCCTAAGGCATTCCAGATTACTGCCATGCTCATTCTTAGGGTTGATTCTGCTATCTACTTCACTAACTGCAACTTTGTCAAGGACAGAATTCTGAGATGGTTGCGTTATGAAAATGAGGAGAGAGCAGAATGTGAATTAGCCGAAATACAATATGTGGTTGTTGACATGTCAGCTGTTAGCGATATTGACTCGAGTGGCATCAGTTCATTTGAAAGGCTATATCATAGCCTTGAGAAATTACATGTCCAGCTTGTGTTGGCAAACGTGGGGAAGATTGTAATGGAGAAGTTGCAGGAATCCAAGTTAACAGAGTTAATTGGACGAGATAAAATATTCCTCTCAGTTGCTGGTGCTGTTATTACTTATGGTCCCAAGAGGGAAGAACTCTAA 1842 0.4055 MKPLETLFTISDNNSLMRKYKGKSKTRKFCLCLQSIFPILDWGRYYTIRNLRGDFIAGLTTASLCIPQDIAYAKLANLDPHHALYASFVTPLVYAAMGSSRDIAIGPAAVVSLLLGAMLSHDIRDHKSHEYLRLAFTATFFAGVTQLALGVLRLGFLIDFLSHAAIVGFMSGAAIIISLQQLRGLLGIPHFTKKTDIISGIGSVKNAIVHHEWNLETIIIGTSCLIFLLITKYIGKKHKKLFWVAAIAPMTCVIVSTICVYITRADEKGVSTINHIKGGLNSVSANEIFFRGKYVVRGFRIGAVAGIVALTEAVSIGRTFAAMKHYTLDGNKEMVAMGTMNIVGSLTSCFVATGSFSRSAVNNMAGCETAASNIVLSIVVLLVLTLFTPVFKYTPNAVLSSIIIAATTNLVNINAVIMIWKIDKFDFMACMGAFFGVIFMNLEYALIIAVSISFVKIVFRVTWPKVVVLGKIPGTSIYRNIEQYPKAFQITAMLILRVDSAIYFTNCNFVKDRILRWLRYENEERAECELAEIQYVVVDMSAVSDIDSSGISSFERLYHSLEKLHVQLVLANVGKIVMEKLQESKLTELIGRDKIFLSVAGAVITYGPKREEL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00548 613 CDD STAS_SulP_like_sulfate_transporter 484 599 - -
Adu10g00548 613 TIGRFAM sulP: sulfate permease 38 602 IPR001902 GO:0015301|GO:0016020|GO:0055085
Adu10g00548 613 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 16 610 - -
Adu10g00548 613 Pfam STAS domain 485 602 IPR002645 -
Adu10g00548 613 SUPERFAMILY SpoIIaa-like 489 603 IPR036513 -
Adu10g00548 613 Pfam Sulfate permease family 51 431 IPR011547 GO:0016021
Adu10g00548 613 ProSiteProfiles STAS domain profile. 483 606 IPR002645 -
Adu10g00548 613 PANTHER SULFATE TRANSPORTER 16 610 IPR001902 GO:0015301|GO:0016020|GO:0055085
Adu10g00548 613 Gene3D STAS domain 463 607 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00548 Adu-Chr10 6230228 6234171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00548 5 609 Inorganic Solute Cotransporters AT1G22150 62.211 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00548 K17470 - gmx:100784124 801.586