Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00536 ATGTCTCACTTTGGAAGGTCAGGTCCACCAGACATTAGCGACACATACTCCCTTCTCGTTCTCAACATCACCTTCCGTACAACCGCCGACGACCTCTTCCCTCTCTTCCACAAGTACGGCGACGTCGTCGACATTTTCATTCCCAAGGACCGCCGCACCGGCGACTCCAGGGGCTTCGCATTTGTTCGCTACAAGTATGCCGACGAGGCTCAAAAGGCTGTCGAGCGCCTCGACGGCAGGGTCGTCGACGGCCGCGAAATCACCGTCCAGTTCGCCAAGTACGGTCCCAACGCCGAGCGCATCCACAAAGGTAGGATTGTCGAATCTGCTCCCAGATCTAAGCGCAGCCGCAGTCCCAGGAGAAGGTATCGTGATGATGATTACAGAGAGAAGGATTATAGGAGGAGGAGTCGCAGCAGGAGTTACGATAGGTATGAGCGTGACAGGCACCGTGGCAGGGACAGGGATTATCGTCGCCGGAGCCGGAGTCGGAGTGCCAGTCCGGACAAGGGTCGTGGAAGGGGACGCTATGATGATGATGACCGCCCTATCCGTAGTATAAGCCGTAGCCGGAGTCGGAGCCGGAGCCGGAGCCGGAGCGTAGATAGCCGCTCTCCTGCTAGGCGCAGCCCAAGTCCTCAAAGGAGTCCATCCCCTAGGACAAGTGCTTCCCCAAGGAAGAAGAGCCCTAGGGGTGAAAGCCCTAGGACTCGCAATGGACACTCCCCTACACCTGTCTCGCCACGTGGTCGTCCTGATGCTTCCCGTAGTCCATCACCTAGAAATTCTGATGGTGATGCATGA 804 0.5759 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFHKYGDVVDIFIPKDRRTGDSRGFAFVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPNAERIHKGRIVESAPRSKRSRSPRRRYRDDDYREKDYRRRSRSRSYDRYERDRHRGRDRDYRRRSRSRSASPDKGRGRGRYDDDDRPIRSISRSRSRSRSRSRSVDSRSPARRSPSPQRSPSPRTSASPRKKSPRGESPRTRNGHSPTPVSPRGRPDASRSPSPRNSDGDA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00536 267 MobiDBLite consensus disorder prediction 102 188 - -
Adu10g00536 267 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 266 - -
Adu10g00536 267 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SC35 1 266 - -
Adu10g00536 267 SMART rrm1_1 17 90 IPR000504 GO:0003723
Adu10g00536 267 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Adu10g00536 267 MobiDBLite consensus disorder prediction 102 267 - -
Adu10g00536 267 SMART rrm2_1 17 90 IPR003954 GO:0003676
Adu10g00536 267 Gene3D - 4 103 IPR012677 -
Adu10g00536 267 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Adu10g00536 267 MobiDBLite consensus disorder prediction 205 225 - -
Adu10g00536 267 SUPERFAMILY RNA-binding domain, RBD 8 101 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00536 Adu-Chr10 6095052 6097871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00536 13 92 Eukaryotic Initiation Factors Gene Family AT3G11400 36.250 9.90e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00536 K12891 - pop:18096633 248.054