Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00534 ATGACGACGAACAGAAACCAGAAGACGACGACCTCACGGGACACGATGAAGCAAGCCACGACCCCACGAGTTGCCTCTGCCGCCGGCGACGATGAGCCCAGGGACGAGACTCGAGTGAGACGACGAGGAAGGCCGCGAGACGTCGACAAGATGAACAACGAGACGCCGGCGAGTGTGACTGAGACGAGACTCGATGCTGTAATCGCAATTATGGAATCTGCTTTGTGCCTCAACATGCCGATGCAGATACAGATGAGTTTAAAGCCACTCTTCAAACCTCTCAACCGTCAATTCGCCACGTGGACGATTCAATCAGCAGCGAAACAGAAGCCATCACTCGTCTTCCGCTTCAACCACTCGTCTCAGCTGCCTCCTCTACGCTGCGTTTCCAGCTCAGCTGGTGGTGGTGACATTCCCTCCGATGCTATTGTTCTCAACGTTGAGGGTATGATGTGCGACGGCTGCGCCAATAACGTCAGGAAGCTTCTAGAAAGCCGACCACAAGTGTCATCTGCTACTGTGAATCTAACCGCCGCTAAAGCAGTAGTGTCTGCCGTATCCGAAGAAAAAGGTTCCCCCAACTGGCAGAAGCAATTAGGAGAAGCACTTGCTCAGCATTTAACTAACTGCGGTTTCAATTCTACCTTTCAAGGCGAGTGA 660 0.5273 MTTNRNQKTTTSRDTMKQATTPRVASAAGDDEPRDETRVRRRGRPRDVDKMNNETPASVTETRLDAVIAIMESALCLNMPMQIQMSLKPLFKPLNRQFATWTIQSAAKQKPSLVFRFNHSSQLPPLRCVSSSAGGGDIPSDAIVLNVEGMMCDGCANNVRKLLESRPQVSSATVNLTAAKAVVSAVSEEKGSPNWQKQLGEALAQHLTNCGFNSTFQGE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00534 219 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 133 215 - -
Adu10g00534 219 PANTHER ATP7, ISOFORM B 133 215 - -
Adu10g00534 219 Pfam Heavy-metal-associated domain 144 190 IPR006121 GO:0046872
Adu10g00534 219 MobiDBLite consensus disorder prediction 1 58 - -
Adu10g00534 219 CDD HMA 144 212 IPR006121 GO:0046872
Adu10g00534 219 MobiDBLite consensus disorder prediction 28 51 - -
Adu10g00534 219 SUPERFAMILY HMA, heavy metal-associated domain 143 187 IPR036163 GO:0046872
Adu10g00534 219 MobiDBLite consensus disorder prediction 1 22 - -
Adu10g00534 219 ProSitePatterns Heavy-metal-associated domain. 147 176 IPR017969 GO:0046872
Adu10g00534 219 Gene3D - 141 218 - -
Adu10g00534 219 ProSiteProfiles Heavy-metal-associated domain profile. 142 216 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00534 Adu-Chr10 6084515 6085969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00534 135 215 Primary Pumps ATPases AT4G33520 59.756 1.76e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00534 - K17686 adu:107468605 297.745