Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00531 atggcggagcgtccttccttcggattgggtccccgattggACTTTCAGCAACTACAATTTGAAGCCCAGCATCGCTGGTTGAGACCTGCAGAAATTTGTGAAATTCTTCGTAACTATCGGATGTTTCAAATCACGTCAGAACCTCATAACAGGCCACCAAGTGGTTCACTATTTCTATTTGATCGAAAGGTTTTGAGATACTTCAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACCGTGAAAGAAGCTCATGAAAAATTGAAGGTGGGAAGTGTTGACGTGTTGCATTGCTACTATGCCCATGGTGAAGAAAATGAAAATTTTCAGAGACGAAGCTATTGGATGCTTGAACCGGATATGATGCACATAGTATTCGTACATTATTTGGAAGTTAAGGGTAACAAGACAAATACTGGAGGAAATATAGATAGTTATGATGTTTCGTCTGACTCCCAAAGGACCCCTTCTCCATCATCTGGCTTACCAACAAATTATAGCAACTTGCCTTCACTGAGTACAGATTCCATGAGTCCAGCTAGCAGTTTGGCATCTTTACGTGAAGATGCTGATTCTGAGGAGATTCACCAAGCAAGCTCCAGATTACACACACTAAATGAGTCACAACATACGCGGAATGGCTCAACTCAAGCTTTTCTGAGATTTGACTATGTTAATTTCTATAATTTTCAGAAAGCACATAGCATGGCATCCTGGGACACTGTGTTGAAGCAATGCAATGCAGAATTGCAGAGTGATCCTTCGTTTGTACCATTTTCTTCCATACCATCGAGTTTGATAGGAAACACTGTAGAACAAGAACGTAATGACTTTGGTGATCTCTTAGGGAGCAAAAGTAGCCTCACTGAGGAGGCAGGGAGCTCGCAATCTATCCAATCAAACTGGCAGATTCCTTTTGAAGAAAGTTCAGGACGCTTGCCAAACTTCACCCAATCATTGAGTTTGGAATTTGGATCCGATTATATATCTGGTTTAGTTGGGAATGAAACACTTAATGCAAGTTCTGAAATTGATCCTCACCTGTTTAACTTTCATGGTGAGCCGAAAGAGCAGCATGTGCAACAACACTATCCAGAACGGCATGCAGATGGACAATCTCAGTATGCACTTCAATCCAATTCTCTGAATAAAGTTCTTGGTGAAGAAAGTCTCAACCATGCTTTCACAGCAAAGCGCACATTATTGGATGGAGACGAGAGCCTGAAAAAAGTTGATAGCTTCTCTAGGTGGATTACTAAAACCCTTGGAGAGGTGGATGATTTGAATATGCAGTCTTCAGCTGGTATTTCATGGGGTACAGATGAATCTGGGCATGTGATAGATGATTCCTCATTGAGCCCGTCCCTTTCTCAGGATCAGCTGTTTAGCATAAATGAATTTTCCCCCAAATGGGCTTATGCTGAAGTGGAAACTGAGGTGGTAATTGTTGGATCTTTTTTGAAGTATCAACCGGAGGTGTCAACCTCTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTCCCTGCTGAGGTTTTAACTAATGGAATTCTGTGTTGCCAGGCTCCACCTCATAAGGTTGGACGGGTTCCTTTCTATGTAACATGTTCAAATAGATTAGCTTGCAGTGAAGTGCGTGAATTCGACTATAGAGAAGGCTTTTCTGGAAATGTAGAATTTGCAGATTTTTATAACGATTCAACTGAAAGGCTGCTGCATTTGCGATTGGAAGAGTTTCTGTCCTCAAAACCAGTGTGCCCATCTAAACAAACCTTTGAGAATGATATGGAGAAAAGAGATGTAATTTTAAAGCTTATTTTCTTAAGAGAGGAAGAGGAATTCTCGAGTAAGGAAGAGCAACATGTAGAATCTGATACATCCTCACAGAAGGTGAAGGCGCATCTGTTTCACAGGCAGATTAAAGAGAAGCTGTACTCATGGCTTCTGCACAAAGTAACGGAAAGTGATAAAGGTCCTAATGTGTTAGATAAGGATGGACAGGGTGTTTTACATTTAGCAGCTGCTCTTGGGTATGATTGGGCTATACAACCAATTTTAACTGCTGGAGGTGGTATCAATTTCCGTGATGTAAATGGATGGACAGCCCTACATTGGGCTGCATCCTGTGGCAGAGAGCGGACGGTGGTTGTCCTTGTCACCATGGGTGCAAATTCTGGAGCATTGACAGATCCATCTCCAGCATTTCCAACCGGAAGAACAGCTTCAGAGCTTGCCTCTACCAATGGGCACAAAGGAATATCTGGTTTCCTTGGTGAATCTTTATTAACCAGTCATCTTGAATCCCTCACAATGGATGATCAATATAAAGGTGGCAGGCAAGAGATTTCAGTAACAAAAGTAGTGCAGACAGTTTCAGAACGAACTGCTACCCCTGTGTTATATGGGGATGATATGCCAGATGATCCCTGCCTTAAGGATTCCCTTACTGCTGTTATTAATGCTACACAAGCTGCAGATCGTATACATCAGATACAGAAGAAGTTTCGTGGGTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTTAGGAAGAGTCTAAAAAGCATAATCTGGTCTGTGGGAATCCTTGAGAAAGTGATATTACGGTGGAGACGCAAGGGCAGTGGCTTGCGCGGATTTAAACCCGATGCCCTTAATAAGGCCCCCATTCAACAGAGTGATCCGCCGAAAGAAGATGATTATGATTTCCTCAAGGAAGGAAGAAAACAAAGTGAGGAGAAGTTCCAAAAGGCCCTTTCAAGGGTCAAGTCCATGGTTCAATATCCAGAGGCACGTGCTCAATACCGGCGCCTGCTAAATGTTGTTGACGACTTCCGTCAAACCAAGGCATGTAATATGGATTTAGTAAATTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGATATGCTCTTAGATGATGACAATTTTATTCCCATAGCATTTGATTGA 3009 0.4138 MAERPSFGLGPRLDFQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVKGNKTNTGGNIDSYDVSSDSQRTPSPSSGLPTNYSNLPSLSTDSMSPASSLASLREDADSEEIHQASSRLHTLNESQHTRNGSTQAFLRFDYVNFYNFQKAHSMASWDTVLKQCNAELQSDPSFVPFSSIPSSLIGNTVEQERNDFGDLLGSKSSLTEEAGSSQSIQSNWQIPFEESSGRLPNFTQSLSLEFGSDYISGLVGNETLNASSEIDPHLFNFHGEPKEQHVQQHYPERHADGQSQYALQSNSLNKVLGEESLNHAFTAKRTLLDGDESLKKVDSFSRWITKTLGEVDDLNMQSSAGISWGTDESGHVIDDSSLSPSLSQDQLFSINEFSPKWAYAEVETEVVIVGSFLKYQPEVSTSNWSCMFGEVEVPAEVLTNGILCCQAPPHKVGRVPFYVTCSNRLACSEVREFDYREGFSGNVEFADFYNDSTERLLHLRLEEFLSSKPVCPSKQTFENDMEKRDVILKLIFLREEEEFSSKEEQHVESDTSSQKVKAHLFHRQIKEKLYSWLLHKVTESDKGPNVLDKDGQGVLHLAAALGYDWAIQPILTAGGGINFRDVNGWTALHWAASCGRERTVVVLVTMGANSGALTDPSPAFPTGRTASELASTNGHKGISGFLGESLLTSHLESLTMDDQYKGGRQEISVTKVVQTVSERTATPVLYGDDMPDDPCLKDSLTAVINATQAADRIHQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKSLKSIIWSVGILEKVILRWRRKGSGLRGFKPDALNKAPIQQSDPPKEDDYDFLKEGRKQSEEKFQKALSRVKSMVQYPEARAQYRRLLNVVDDFRQTKACNMDLVNSEETVDGVEDLIDIDMLLDDDNFIPIAFD 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00531 1002 ProSiteProfiles Ankyrin repeat profile. 700 732 IPR002110 GO:0005515
Adu10g00531 1002 Pfam Ankyrin repeats (3 copies) 648 726 IPR002110 GO:0005515
Adu10g00531 1002 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 832 1002 - -
Adu10g00531 1002 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 230 833 - -
Adu10g00531 1002 Pfam IPT/TIG domain 467 545 IPR002909 -
Adu10g00531 1002 SUPERFAMILY Ankyrin repeat 657 759 IPR036770 -
Adu10g00531 1002 Gene3D - 829 872 - -
Adu10g00531 1002 Gene3D Immunoglobulins 460 555 IPR013783 -
Adu10g00531 1002 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 218 - -
Adu10g00531 1002 Pfam IQ calmodulin-binding motif 851 870 IPR000048 GO:0005515
Adu10g00531 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 828 876 IPR027417 -
Adu10g00531 1002 Gene3D - 629 762 IPR036770 -
Adu10g00531 1002 ProSiteProfiles IQ motif profile. 849 873 IPR000048 GO:0005515
Adu10g00531 1002 MobiDBLite consensus disorder prediction 144 188 - -
Adu10g00531 1002 SMART CG_1_2 18 136 IPR005559 GO:0003677
Adu10g00531 1002 ProSiteProfiles Ankyrin repeat region circular profile. 700 726 - -
Adu10g00531 1002 MobiDBLite consensus disorder prediction 144 213 - -
Adu10g00531 1002 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 832 1002 - -
Adu10g00531 1002 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 218 - -
Adu10g00531 1002 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Adu10g00531 1002 ProSiteProfiles Ankyrin repeat profile. 667 699 IPR002110 GO:0005515
Adu10g00531 1002 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 230 833 - -
Adu10g00531 1002 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Adu10g00531 1002 SMART iq_5 848 870 IPR000048 GO:0005515
Adu10g00531 1002 SMART iq_5 825 847 IPR000048 GO:0005515
Adu10g00531 1002 SMART ANK_2a 667 696 IPR002110 GO:0005515
Adu10g00531 1002 SMART ANK_2a 700 729 IPR002110 GO:0005515
Adu10g00531 1002 SUPERFAMILY E set domains 467 553 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00531 Adu-Chr10 6035958 6043514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00531 1 979 CAMTA Transcription Factor Family AT5G64220 49.907 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Adu10g00531 CG-1 9.1e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00531 K21596 - gmx:100818124 1435.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04186 03 130949382 130954028 Adu10g00531 10 6035958 6043514 PCT