Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00523 ATGTCTCTCAAATCCTCTTCGTTCTTCTTCGCGCCAAGTAACCAGGGCAACGTCTCTCCCTCTTTACGTGACCTTTCAGTTTTACTCTTAGTGAAACACCAAGTCACAGTAAATCACCCAGCAGTAACAACACTTGTTGATTTGGGATTAGGGCAAAGAACAGCTACAGCAAGTCAAACTTCCAAGTTCGAAGTCAAATCTTCACTCTTCGGCCTAGCTCAGCTAACAAAAGAGAAACGGATCTCATCGCCGCCGTGGCGTAAAATGGCCACCGCCACTGCAGCTACCTCGCAGCTGCCGGCGCCGCCAGCGCAGCAGCAATTTCTCAACTTAGAATCCCTGGCTCGGATAGACACTACAACTCTCTCACAGTCGGAGCTCCATGCCCTGTCTCTCTCCTCCCTCTCCGCCTTCGATCTCCACTCCACCCGTCGCCACATCGTCACTCCCAAAATCGATCCGTCTCTCTTCAACGAGAGCGCCGGATCTCGCCGCCAGACATACTCCCGTCCTCGCCGCCCCGAGTCCTCTCCCACCGGCCGCCGACGCCGTGTTGCCGGCCTCCTCCCCGCCGCTAAGCTACCTTCTCTCCCTTCCGATGACCTTGGAAATGCCGAGAACCGGGTGATCATCGATTATCTGAAACAGTATATCAGGGAAGATCCCAAATTCGACCAAGTCGAGTTCGCTCCGCCTTCTTCCGCTTCCGCGCTGGTCGCCTACCACGGAGGTGGTGCTGGCGAAGGGAGAGGAGAGCTCGCTATGGTGAAATTCGGAGAGAGGAAGAGGAAGAGAGGGCGGAAGCCGAAGGTGAAGGTGAACTTGGAGGAATCCTACAGCGGGATGGAGATTGTGAACAAGAACGGAGTGGTGATCAATCTGATGGATCTAGCGAAGGCGGAGGATCCTTTTGCGGAGGAGCTGAGGAGGCGGACTGACGGACTGCAGGGAGAGGAGGAGCTGTTAGGGTTTCTGAGGGATTTAGAGGGACAGTGGGGAAGCAGGAGGAGGAAGAGGAGGATTGTGGACGCTGCCAATTTCGGTGACGCATTACCGCTTGGTTGGAAGCTTATTCTCGGGTTGAAGAGAAAGGATGGTCGCGCATGGATCTATTGTCGCAGATACATAAGCCCTAGTGGACAGCAATTTATGTCTTGTAGAGAAGTTGCTTCCTATTTGCAGTCTCTTATTGGCCATAGTGATGCACCGTTGCAAATCGGTCATAGGAGTGAGAATTTTCCGCAGGAACAAAGAGCAATCACTGAACACTCTGCAGGTGTTGCCCATGAGGATCAACGTGAATGGCAGATTGTTGTAGCTAACTCAGATGTACCTAGTTTTTCTGTTTCTAATGAACGTGGGATGGAATTGGCCTTGTTGGGTTTGGAAAATCTTGCAGACGTGGAAATACATGACCTATTTGAATGTCACAAATGCAATGTGACCTTTGACGAGAAGGATTCATACTTGCAGCACTTATTGTCATTTCACCAGAGAACAACAAGACGATATCGGCTTGGATCTTCTCTTGGAGATGGAGTTATAATTAAAGATGGAAAGTTTGAGTGCCAGTTCTGTCACAAGGTGTTTTCAGAAAGGCGTCGCTACAGTTCTCATGTGGGGATCCATGTTAGGAGTAATGTGAGGCAGGCTGAAGATTCGTCAGGTCTGGAAAATGTTCAACGGACAGACAAGTCTCCAGTGAGGGAGGACATGCTGCTTTCAAGACTCTCCAGGATGGATGCCCTTATTGAAATTGCTCAGAGCTCTATCATGGAGGATTGTGACATGGAGCCTGCTTCGAAAGTTGCTGCTTGTAGCTTGGATCAAGATATAAACTTTGAGTCAGAACAGCAAATGGAAGATAGCTTAAATGGAACAAATGTTGTTCAAGTTTTAAATCAGCAGGATAGTCCAGAGTTACACATGGATGTGGAAGAAGAGGAAACTGATGATGATAGCCAAGTTATTGATGCAAAGATGGTTACTTGTCTAGATCACACGGGTTTGTTATGTGTAAATGAGAAAAATGGTAATCCATCTGTTGAAGTGTTTGATAAGTCTGGGATTGATATGGGAGGAGCTTCTCAAGGCCCTTTGCTTAATTTATCTTGCAAGGACAAAATATCAGATTCTGGGGAGAATGAAAATTTTTGTTGCTCTAATATCAAAGAAAAGTTTAAGTTTAATGAAGATAACAATAATAAGAATGAATTGGGAATTGGTTCAGATGGTTGCAAAGATGTTCCTCTTAGGACCAATGTTCAAGAGTTGCTAATGCCAGCTTCTGAAGAAAATGTGATCGACTCTAGGGTTTCTAAATCTCCTATATCCCAAATGCAACCTTTGTATTCCTCTCCTGCTTTCAGCTCTTATAAGGTAGGAAAACAATCTTGTACTGAAGATCATGAGTATAAAAATGTGAAGCGGTTCCAGGAATTGGATGAAGTCAGTACTACTAAGCATGATGCTACAAGTGTTCAAGATTCCTTTTCACTGCCTGATGTGCAAACTGATACGATAAACAAAACAGTGATGGAAACAACATATCCCTCTTCTGTTCAGGTTGAATCACAAGAAGTTATGCAGCTTACAACTGTGTGTGTTTGGTGTGGAATAGAGTTCAACCATGATGCCCTTAATTCTGAAATACAACCTGATTCTGTTGGATTCATGTGTCCAGCTTGTAAGGCAAAAATCTCTGGTCAAATTAATGTGTTGGACAGTTGA 2730 0.4619 MSLKSSSFFFAPSNQGNVSPSLRDLSVLLLVKHQVTVNHPAVTTLVDLGLGQRTATASQTSKFEVKSSLFGLAQLTKEKRISSPPWRKMATATAATSQLPAPPAQQQFLNLESLARIDTTTLSQSELHALSLSSLSAFDLHSTRRHIVTPKIDPSLFNESAGSRRQTYSRPRRPESSPTGRRRRVAGLLPAAKLPSLPSDDLGNAENRVIIDYLKQYIREDPKFDQVEFAPPSSASALVAYHGGGAGEGRGELAMVKFGERKRKRGRKPKVKVNLEESYSGMEIVNKNGVVINLMDLAKAEDPFAEELRRRTDGLQGEEELLGFLRDLEGQWGSRRRKRRIVDAANFGDALPLGWKLILGLKRKDGRAWIYCRRYISPSGQQFMSCREVASYLQSLIGHSDAPLQIGHRSENFPQEQRAITEHSAGVAHEDQREWQIVVANSDVPSFSVSNERGMELALLGLENLADVEIHDLFECHKCNVTFDEKDSYLQHLLSFHQRTTRRYRLGSSLGDGVIIKDGKFECQFCHKVFSERRRYSSHVGIHVRSNVRQAEDSSGLENVQRTDKSPVREDMLLSRLSRMDALIEIAQSSIMEDCDMEPASKVAACSLDQDINFESEQQMEDSLNGTNVVQVLNQQDSPELHMDVEEEETDDDSQVIDAKMVTCLDHTGLLCVNEKNGNPSVEVFDKSGIDMGGASQGPLLNLSCKDKISDSGENENFCCSNIKEKFKFNEDNNNKNELGIGSDGCKDVPLRTNVQELLMPASEENVIDSRVSKSPISQMQPLYSSPAFSSYKVGKQSCTEDHEYKNVKRFQELDEVSTTKHDATSVQDSFSLPDVQTDTINKTVMETTYPSSVQVESQEVMQLTTVCVWCGIEFNHDALNSEIQPDSVGFMCPACKAKISGQINVLDS 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00523 909 ProSitePatterns Zinc finger C2H2 type domain signature. 523 543 IPR013087 -
Adu10g00523 909 ProSitePatterns Zinc finger C2H2 type domain signature. 476 497 IPR013087 -
Adu10g00523 909 ProSiteProfiles Zinc finger C2H2 type domain profile. 474 502 IPR013087 -
Adu10g00523 909 SUPERFAMILY DNA-binding domain 349 405 IPR016177 GO:0003677
Adu10g00523 909 Gene3D - 329 434 - -
Adu10g00523 909 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 107 906 IPR037472 -
Adu10g00523 909 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 341 418 IPR001739 GO:0003677
Adu10g00523 909 SMART c2h2final6 474 497 IPR013087 -
Adu10g00523 909 SMART c2h2final6 521 543 IPR013087 -
Adu10g00523 909 MobiDBLite consensus disorder prediction 166 180 - -
Adu10g00523 909 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 107 906 - -
Adu10g00523 909 Gene3D Classic Zinc Finger 463 551 - -
Adu10g00523 909 ProSiteProfiles Zinc finger C2H2 type domain profile. 521 548 IPR013087 -
Adu10g00523 909 MobiDBLite consensus disorder prediction 151 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00523 Adu-Chr10 5968739 5973001 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu10g00523 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00523 - - adu:107468625 1560.04