Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00513 ATGGAGGTGCAGTTGCAGAGCGATCCATGGGAGTGGGAGAAGCCAATGGCCACTTATCTGCTTCGCTACCACTCCGACCAGCTCCGATCCATCGCTTCCTCTCCCGATCCCAATCTTCACTATCCTCTCTTCATTGACTTCGCAGAGTTGATGGAGGAACATCCTCACCTTGCGCGTCTCATATTCTCCCAACCCACCCCTTACTTGCAAGCCTTCGACAATGCTGCTCTCTTGTCTCACAGAATCGTGGTGAGAGATTTAGAGCAAGAGAAGAATGTTGTTGAGAAGAATTTCATTCATGTTCGAATCAACATCAGTGGTTCTCCCCTTGAATGCTCTGAGACGTTTCCGACCATAGGGCGTGTTCGAGTGCAGCATCGCGGAATTCTTCTCACTGTGAAAGGGACTGTAATCAGGTCTGGGGCAATCAAGATGCATGAAGGAGAGAGGAAGTATATGTGCAACAAATGCAAGAAGAGCTTCACAGTTTATCCTGAGGTTGAAGCTCGAAACTCCATATCATTACCTTCAATTTGCCCCATGCAGAAATTGAAGCCCTGTGGAGGCACAAACTTCCAGTATGTAGAAAATACTATAGTATGCCATGATTATCAGGAGATAAAAATCCAAGAAAGTACACAGGTGCTAGGTGTTGGGGCCATTCCTCGTTCAATTCTTGTCATCTTGCATGATGATCTGGTTGATGTTGTTAAAGCTGGAGATGATGTGATTGTCACTGGTCTCTTGACTGCAAAATGGTCTCCAGAGTTGAAAGATGTGCGCTGTGACCTTGATCCTGTATTAATAGCCAACAATGTAAGGAGGACCAATCAACTGAAGTCAGAAATGGACATTTCTGATGACTTAGTTACAAAATTCAAGCAGTTCTGGGAACATTTCAAAGATGCACCCTTAAAAGGTGGGAGGAATGCTATTCTTCGAGGAATTTGCCCACAAGTATTTGGCCTGTTTACTGTCAAGCTGGCCGTTGCATTAACACTTATAGGAGGTGTTCAACATGTCGATGCTTCTGGAACAAGGGTAAGAGGGGAATCTCACTTACTCTTGGTTGGTGATCCCGGCACTGGAAAGTCTCAGTTTCTGAAATTTGCAGCGAAATTGAGCAATAGATCTGTTATTACCACTGGGCTGGGAAGCACAAGTGCTGGATTGACGGTTACTGCATGGATGTTGGAAGCTGGAGCCCTTGTTTTAGCAGATGGAGGATTGTGCTGCATAGATGAATTCGATAGCATGAGGGAACATGACAGGGCAACAATACATGAAGCCATGGAGCAGCAAACAATAAGTGTAGCTAAGGCTGGTCTTGTAACAACACTCAGCACTAGAACAACGGTATTTGGTGCCACAAATCCTAAAGGGCAATATGACCCCGATCAACCTCTGTCTGTCAATACAACACTCTCTGGTCCTTTACTTAGCAGGTTTGATATTGTCCTTGTGCTCTTGGATACAAAGAATCCTGAATGGGATGCAGTAGTTTCATCCCATATTCTTTCTGAGGCAGAACCTGATAGAGCCAACAACGATGAAGATCTAGCAAAAGTCTGGCCTCTTTCTACACTCAAGAGGTACTTACACTATGTGAAAGAAACTTTCAAGCCAGTCCTTACAAGAGAGGCCGAAAGAGTCATATCTAGCTATTATCAACTTCAAAGGAAGTCTGCAACTCATAATGCAGCCAGGACCACCGTCCGGATGCTGGAAAGTTTAATACGCCTAGCTCAAGCTCATGCAAGGCTGATGTTCAGAAATGAAGTGACCCGATTAGATGCCATCACAGCAATTTTATGCGTAGAATCCTCAATGACTACCTCAGCTATAGTGGATTGCATTGGGAATGCCCTGCACTCCAATTTTACTGAAAACCCTGATCAGGAATATGCTAAGCAAGAAAGACTGATCCTGGAAAAGTTTGCAACTCTTATTTGGCAATTAAAGCGAGTGTTAAGACAATACATGAATCTCGCAGAATATCAAGATTTCAAGCTTCACTTACTAGTCTCATCTTCTGAATTCTAA 2043 0.441 MEVQLQSDPWEWEKPMATYLLRYHSDQLRSIASSPDPNLHYPLFIDFAELMEEHPHLARLIFSQPTPYLQAFDNAALLSHRIVVRDLEQEKNVVEKNFIHVRINISGSPLECSETFPTIGRVRVQHRGILLTVKGTVIRSGAIKMHEGERKYMCNKCKKSFTVYPEVEARNSISLPSICPMQKLKPCGGTNFQYVENTIVCHDYQEIKIQESTQVLGVGAIPRSILVILHDDLVDVVKAGDDVIVTGLLTAKWSPELKDVRCDLDPVLIANNVRRTNQLKSEMDISDDLVTKFKQFWEHFKDAPLKGGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDASGTRVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGATNPKGQYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILSEAEPDRANNDEDLAKVWPLSTLKRYLHYVKETFKPVLTREAERVISSYYQLQRKSATHNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCVESSMTTSAIVDCIGNALHSNFTENPDQEYAKQERLILEKFATLIWQLKRVLRQYMNLAEYQDFKLHLLVSSSEF 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00513 680 SMART AAA_5 350 493 IPR003593 -
Adu10g00513 680 CDD MCM9 311 609 - -
Adu10g00513 680 Pfam MCM P-loop domain 310 507 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu10g00513 680 Pfam MCM AAA-lid domain 528 609 IPR041562 -
Adu10g00513 680 ProSiteProfiles MCM family domain profile. 308 505 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu10g00513 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 318 619 IPR027417 -
Adu10g00513 680 Gene3D - 122 250 IPR012340 -
Adu10g00513 680 PRINTS Mini-chromosome maintenance (MCM) protein family signature 479 487 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu10g00513 680 PRINTS Mini-chromosome maintenance (MCM) protein family signature 401 415 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu10g00513 680 PRINTS Mini-chromosome maintenance (MCM) protein family signature 349 364 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu10g00513 680 PRINTS Mini-chromosome maintenance (MCM) protein family signature 429 442 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu10g00513 680 SUPERFAMILY Nucleic acid-binding proteins 40 257 IPR012340 -
Adu10g00513 680 Pfam MCM OB domain 122 250 IPR033762 -
Adu10g00513 680 Gene3D - 146 202 - -
Adu10g00513 680 PANTHER DNA HELICASE MCM9 34 647 - -
Adu10g00513 680 Gene3D - 281 615 IPR027417 -
Adu10g00513 680 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 34 647 IPR031327 GO:0003677|GO:0005524|GO:0032508
Adu10g00513 680 SMART mcm 115 611 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00513 Adu-Chr10 5857790 5864857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00513 16 634 Core DNA Replication Machinery Family AT2G14050 75.159 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00513 K10738 - gmx:100776255 1110.13