Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00474 ATGAGTTCAGAAGATTGCCTTGGTTGGGCTGCAAGAGATGTATCTGGACATCTCTCCCCATACAAATTCAATCGCAGGGCTGTAGGAGATGATGATGTTTATGTTAAGATCACACACTGTGGTATTTGTTATGCTGATATCGCTTGGACAAGGAATAAACTTGGTGACTCCAAGTACCCTGTTGTGCCAGGACATGAGATTGCAGGCATTGTGAGCAAGGTTGGTTCCAATGTCAAGCGTTTCAGTGTTGGTGACCATGTTGGAGTGGGGACTTATGTCAACTCATGCCGCGACTGCGAGTACTGCGATGATGGACTAGAACATCAGTGCAGTAAGGGAGTTTTTACCTTTAATGGGGTTGATTCTGATGGTACAATCACAAAGGGAGGATACTCCAATTTCATAGTAGTCCATGAAAGGTATTGTTTTATGATACCAAAGAGCTATCCATTGGCTTCAGCAGCACCTTTGCTCTGTGCCGGAATCACTGTTTATTCGCCGATGATTCGTCACAATATGAATCAGCCTGGTAAATCTCTAGGAGTTATTGGCCTTGGTGGCCTTGGACATATGGCAGTTAAATTTGGAAAGGCTTTTGGTTTGGATGTAACAGTTTTCAGCACCAGCATATCTAAAAAAGATGAGGCCCTAAATCTTCTTGGTGCAGATAATTTTGTTGTTTCATCTGATCAAGAACAAATGAGTGCATTGGCTGAGTCATTAGACTTTATAATTGACACAGCATCTGGTAATCACCCTTTTGATCCTTACATGTTTCTTCTGAAAACATGTGGTGTCTTAGTCTTAGTTGGGGCTCCAAGTGAAATCAAATTAAGCCCAGGAAGCCTTATTGGTGGGATGAGAAGCATTTCTGGAAGTGCTGCAGGAGGCACAAAAGATACCCAAGAGATGATTGATTTGTGTGCTGAAAAGGAGATTTATCCAAATATAGAAGTGATTCCCATTGAATATGCTAATGAAGCTTTTGAGAGGATCATAAACAAAGATGTCAAGTATAGTTCACTCCGTTCTTGGCTTCTACCACCGCTTTCTCCGAATTACCCTCGCACTCATGGATTTCCCTTCCACAATCCGATTCATCGCTCAGGCCAGCGAGATCTACCGCATCTCTCATCCCAATTCCAAGGCTCTCAAGCATTTCCCTCCGTACTATCCACCACCCAGGAAGACGAGGTGTTCGACGTAATGGCGCTGAGAAATCTCGTCAAGTTTGAGAGGCAGAGGTTCAGTGCTGCCTGTGCTGAGATCGAGAATGAGAGGATTGCGGCTGCCTCCGCTGCTGAGGAGGCCATGGCCATGATCCTCCGGCTGCAGAATGAGAAGAGCGCCATTGAGATTCAGGCCAATCAGTTTCGGAGGATGATGGATCAGAAACAGGACTATGATAATGAGGTCATTGATAACTTGAGATGGTCCATTGTCCATCATGAGAATCAGAAGTCTTTGTTGGAGGAGCAGTTGGCCATTTACAGGGAGAAGCTCAGGCAGTTCTTGACTGATGATGAGATTGACCTGCTTGATGGCTCTGATAACCCTAGAGGTGGATTCTTGGATTTTGCTATTGAGTACGATGTTGATAATGCTGATGTTGATGATCCTGGTTCCGGGCCTGATAATGTTTATTCAGAAAATGATGATGATCATTCCCGTAATGCTTATTCAGAAAACAATGATCATGATGAGGATCATGCCCGTAATGCTTTTTCAGAATATGATGATAATGATAATGATGAGGATGATGCTGGTAATGCTTCTTCAGAAAATGATGTTGATGCCGGTAATGTTTCTTCAGAAAATGATGTTGATGCTGGTGATGCTTCTTCAGAAGCTGATAATGATGACGATCGTCATCATGCTTGA 1881 0.4349 MSSEDCLGWAARDVSGHLSPYKFNRRAVGDDDVYVKITHCGICYADIAWTRNKLGDSKYPVVPGHEIAGIVSKVGSNVKRFSVGDHVGVGTYVNSCRDCEYCDDGLEHQCSKGVFTFNGVDSDGTITKGGYSNFIVVHERYCFMIPKSYPLASAAPLLCAGITVYSPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLDVTVFSTSISKKDEALNLLGADNFVVSSDQEQMSALAESLDFIIDTASGNHPFDPYMFLLKTCGVLVLVGAPSEIKLSPGSLIGGMRSISGSAAGGTKDTQEMIDLCAEKEIYPNIEVIPIEYANEAFERIINKDVKYSSLRSWLLPPLSPNYPRTHGFPFHNPIHRSGQRDLPHLSSQFQGSQAFPSVLSTTQEDEVFDVMALRNLVKFERQRFSAACAEIENERIAAASAAEEAMAMILRLQNEKSAIEIQANQFRRMMDQKQDYDNEVIDNLRWSIVHHENQKSLLEEQLAIYREKLRQFLTDDEIDLLDGSDNPRGGFLDFAIEYDVDNADVDDPGSGPDNVYSENDDDHSRNAYSENNDHDEDHARNAFSEYDDNDNDEDDAGNASSENDVDAGNVSSENDVDAGDASSEADNDDDRHHA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00474 626 MobiDBLite consensus disorder prediction 534 626 - -
Adu10g00474 626 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 180 207 IPR029752 -
Adu10g00474 626 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 313 IPR036291 -
Adu10g00474 626 ProSiteProfiles GTD-binding domain profile. 400 498 IPR007656 -
Adu10g00474 626 Coils Coil 434 461 - -
Adu10g00474 626 Gene3D - 160 315 - -
Adu10g00474 626 SMART PKS_ER_names_mod 16 295 IPR020843 GO:0016491
Adu10g00474 626 Coils Coil 473 500 - -
Adu10g00474 626 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Adu10g00474 626 CDD CAD1 8 339 - -
Adu10g00474 626 Pfam Zein-binding 404 494 IPR007656 -
Adu10g00474 626 MobiDBLite consensus disorder prediction 548 578 - -
Adu10g00474 626 Pfam Alcohol dehydrogenase GroES-like domain 31 143 IPR013154 -
Adu10g00474 626 PANTHER ALDEHYDE REDUCTASE 5 340 - -
Adu10g00474 626 Gene3D - 9 339 - -
Adu10g00474 626 SUPERFAMILY GroES-like 15 178 IPR011032 -
Adu10g00474 626 MobiDBLite consensus disorder prediction 594 610 - -
Adu10g00474 626 Pfam Zinc-binding dehydrogenase 187 309 IPR013149 -
Adu10g00474 626 PANTHER - 5 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00474 Adu-Chr10 5524709 5540963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00474 5 339 Monolignol Biosynthesis Gene Families AT1G72680 73.134 8.17e-180 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00474 K00083 - vvi:100244482 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03255 03 118904802 118906226 Adu10g00474 10 5524709 5540963 PCT