LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu10g00452	ATGTTGGAGTCACTAGCTCATGGTCAAAGTTTTAAGCTTAAGGGATATGACTTAATCAAAGATAACAGTCCTAAATGTTATGCTATTTCATCATTCAGTAGAAGTTCTGTTTTCAAGGTTTGTTCAGATAAAAAGCAAGTGTCGCTGCTTTCACTTGGAGTTAGTTATAGGAGCACCTCCGTGTCTGAGAATTTATGTCAAAGCAAACTTCTCAATGTTCCATCATTTTATAGTTGGAAAGGATTCTATCTCTCTAAGTATACGCCATTACGGTTCGAGCGGTTGCAAACAAGTGCAACTTATGATGTTGCTGGTGCTGTTGAAGTCATCCATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTAACTGTCTTAATTGTTCCCACATTCAAGTCAATTAAAGCCAGTCCTATACTTGGTTTCTTCTTGGCTGGAGTTGTACTTAGCCAGTTTGGTTTAATCAGAAACCTTACAGATGTTAAAGTTTTGTCCGAATGGGGGATCCTTTTCTTGTTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTGAAAGCTCTTGCAAAATATGCCTTCGGTATGGGATTTACTCAGGTTGTATTATCTACTTTAGCATTTGCTGCTTTTGAACTCCCACCAAATGGGGCTATTGGAACAAAAATTTTGGAATTCCTTTTCCATTCAAGGCCAGATCTGGTGAATATTAGAAGTATTGATGAAGCTGTGGTAATTGCTGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAGGGTGAGCTACCTACAAGATTTGGTTCAGCAACTCTGGGAATACTTTTATTGCAGGACATAGCTGTTGTCCCTCTTCTAGTCATTCTTCCAATACTAGAGAGCCAGGTTGTTGCAGATGCAAGGAGCTCAGAGGCCTTCGTTGCACTTTGCTTGCTGACTGTTGCTGGAACTTCACTTGTCACGCAGCATTTGGGTTTTAGTGATACGCTTGGGGCATTTTTAGCTGGGGCACTTTTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTTATTGGATTATTTTTCCTAACTACAGGGACTTCCATTGACATGCAGCTTCTTATGCGAGAGTGGCCACATGTACTTGCACTCTTGGCAGGATTGATTTCTATCAAGACATTGATCATAACAGCAATCGGTCCTTGTGTTGGGCTTAGTTTGCAAGAAAGTGTGAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTCGTTGTTTTCTCCTTAGCAAATAGGCTTGGGGTGCTTCCACTTGAGCTCAACAAGTTGCTCATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTTAATGAAGCTGGAAGAAGGGCTGCTGATTTTATTGATGGAAAATTCGATGTGGAGTTTAAAGCTTCAGAGATGGTCAACTTTGGTGTCACTGAACCTGTTGTTATAGTTGGATTTGGACAAATGGGCCAGGTCCTTGCAAATTTCCTTTCCAATCCGTTGGCTTCAGGAGGAGACAGTGATGCTGCAGGATGGCCTTATGTGGCTTTTGATCTTGACCCCGCACTAGTAAATGCTGCTAAAAAAGCCGGCTTTCCAATTCACTATGGGGATGGATCACATCCTGCTGTTCTTCAGTCGGCCGGTATCTCTTCTCCAAAAGCTATTATGGTTATGTTCCCCGGCAAGGAAAAGACAGCGGAAGCTGTTCAGAGGCTACGGTTTACTTACCCTGCAATCCCAATCTATGCCAGAGCTAAAGATCTTGAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACAGATGCTGTTTTGGAAAATGCAGAGACTAGCTTACAGCTGGGTTCTAAGCTTCTGAAAGGTTTCGGAGTGATGTCGGATGACCTAGCATTTTTGAGTCAGCTCATTAGAGATTCCATGGAACTACAGGCTCAAGAAGCAGCCAGCTTCGCCAAATGCGATGAATTAAATATGACAAAACAACTGCAGGTGAGAGTTGGTGACTCAATTGAGGGACATGCACCTATGCCAACTACTTCATCAGAATTGGACCAGCCGCATCAAGTTTCCCTCCCTAGAATTCAGCCAGTTGCGGAACAGCCAGTTGTAGAACAAGACGATGAACTCAATCAAACTGAAAGAAGGCGCTGA	2202	0.4255	MLESLAHGQSFKLKGYDLIKDNSPKCYAISSFSRSSVFKVCSDKKQVSLLSLGVSYRSTSVSENLCQSKLLNVPSFYSWKGFYLSKYTPLRFERLQTSATYDVAGAVEVIHDLGLDTLTFLAVTVLIVPTFKSIKASPILGFFLAGVVLSQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGFTQVVLSTLAFAAFELPPNGAIGTKILEFLFHSRPDLVNIRSIDEAVVIAAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPILESQVVADARSSEAFVALCLLTVAGTSLVTQHLGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGLLIGLFFLTTGTSIDMQLLMREWPHVLALLAGLISIKTLIITAIGPCVGLSLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAADFIDGKFDVEFKASEMVNFGVTEPVVIVGFGQMGQVLANFLSNPLASGGDSDAAGWPYVAFDLDPALVNAAKKAGFPIHYGDGSHPAVLQSAGISSPKAIMVMFPGKEKTAEAVQRLRFTYPAIPIYARAKDLEHLLDLKKAGATDAVLENAETSLQLGSKLLKGFGVMSDDLAFLSQLIRDSMELQAQEAASFAKCDELNMTKQLQVRVGDSIEGHAPMPTTSSELDQPHQVSLPRIQPVAEQPVVEQDDELNQTERRR	733

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu10g00452	733	Pfam	Sodium/hydrogen exchanger family	305	466	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
	Adu10g00452	733	Pfam	Sodium/hydrogen exchanger family	119	297	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
	Adu10g00452	733	Gene3D	-	300	473	IPR038770	-
	Adu10g00452	733	Gene3D	-	112	299	IPR038770	-
	Adu10g00452	733	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	299	695	-	-
	Adu10g00452	733	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	57	299	-	-
	Adu10g00452	733	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	57	299	-	-
	Adu10g00452	733	MobiDBLite	consensus disorder prediction	687	733	-	-
	Adu10g00452	733	MobiDBLite	consensus disorder prediction	691	705	-	-
	Adu10g00452	733	Gene3D	-	497	667	-	-
	Adu10g00452	733	ProSiteProfiles	RCK N-terminal domain profile.	497	629	IPR003148	GO:0006813
	Adu10g00452	733	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	299	695	-	-
	Adu10g00452	733	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	498	636	IPR036291	-
	Adu10g00452	733	Pfam	TrkA-N domain	498	621	IPR003148	GO:0006813

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu10g00452	Adu-Chr10	5208949	5215671	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu10g00452	14	685	Inorganic Solute Cotransporters	AT4G04850	68.680	0.0	916

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu10g00452	-		-	aprc:113858933	1023.46