Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00381 ATGACGAATTCTAACGAGGTAGAGAATCACAGAAACAGCGTCGGCGTCGCCACAAAACAAACGAAGAAGATCAACAGAGAGGAGAAAGGCAAGTCCTCCTCGATTTCCTCGTTCGTGTGCGAAATCTGCATTGTCACTAAAACCGAAGCGGAATCTTTCACCATAAGTGGTTGCACACACTCGTATTGTACGGATTGCGTGGTGAAGTACGTTTGTTCTAAGCTCGACGACAACGTGATCAATATCCGGTGTCCGATGCCGCGGTGCCGTGGTCTATTGGAAACCAATGGTTGCCGCGAGATTCTGCCAAAGTCGGTATTGCATCGGTGGGAGAAGTCATTGCGTGAAGCTGCTGTTCTTGAGAGCGAGAGCAAGAGATTCCTGTATTCCCGCCCTAGGCAGATGTGCGTCACGTGCACGGATGAAGATAGAGTGATGATGAAGTTAGCGGAGAGGAACGGGTGGAAGAGGTGCCCAAAGTGCAGGTTCTACGTTGAGAAGGATCCTTTGACGTGCAATAAAATACTTTGCAGGTGTGGTGAAGTCTTCTGCTACGGCTGTGGCAGTTCCACCTGTGTCACTACTGGATTCGGCCATCCCTGCCGTCCCGCCTGCCGTCTTCCATCATGGGCTATTGGTCTGTCAATTCTATTTGGATTTATCATTCTTTTCCTATGTTTGGATGAAAACCATCGATGA 699 0.4921 MTNSNEVENHRNSVGVATKQTKKINREEKGKSSSISSFVCEICIVTKTEAESFTISGCTHSYCTDCVVKYVCSKLDDNVINIRCPMPRCRGLLETNGCREILPKSVLHRWEKSLREAAVLESESKRFLYSRPRQMCVTCTDEDRVMMKLAERNGWKRCPKCRFYVEKDPLTCNKILCRCGEVFCYGCGSSTCVTTGFGHPCRPACRLPSWAIGLSILFGFIILFLCLDENHR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00381 232 ProSitePatterns Zinc finger RING-type signature. 58 67 IPR017907 -
Adu10g00381 232 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 140 191 - -
Adu10g00381 232 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 28 127 - -
Adu10g00381 232 MobiDBLite consensus disorder prediction 1 20 - -
Adu10g00381 232 SUPERFAMILY RING/U-box 37 117 - -
Adu10g00381 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 121 IPR013083 -
Adu10g00381 232 MobiDBLite consensus disorder prediction 1 28 - -
Adu10g00381 232 ProSiteProfiles TRIAD supradomain profile. 36 232 IPR044066 -
Adu10g00381 232 ProSiteProfiles Zinc finger RING-type profile. 40 88 IPR001841 -
Adu10g00381 232 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 28 127 IPR031127 GO:0004842|GO:0016567
Adu10g00381 232 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 140 191 IPR031127 GO:0004842|GO:0016567
Adu10g00381 232 SUPERFAMILY RING/U-box 143 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00381 Adu-Chr10 4524934 4525632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00381 33 201 ARIADNE family AT3G27710 22.791 5.54e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00381 K11975 - twl:120005643 160.229