Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00375 ATGAGAGTCTTCTTCACTCACCTTAACTCCCTCATTATCATTCTTATTAGCTTCTTCTTCTTCATTACTTCATCAACCTCTTTGGATACTTTAACCGGAACACAAATCCTCAAAACCAACCAAACCTTGTTGTCAGAAAACCAGACCTTCGTTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAGTCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAATCCCATCGACAACTCCGCAGGCCATCTCAAGATCGGAGACAACGGAAACTTTGTCCTTCTCAATTCATCCGGGAACCCCGCATGGTCTTCCAACCAAACCAACGCCAAGAATCCAGTTATCCAGCTCCTCGATACCGGCAACCTTCTTCTTAAAGATTTATCAGACACGACAAATAATAACTACTTGTGGCAGAGCTTCGAATACCCAACGGATACCTTGTTACCGGGGATGAAGGTCGGTTGGAACCTGGACACAGGAACGGAGAAGCACTTAACATCATGGAAGGTCGAAGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGGCCCTCCTCAGGAGAAACCAAACTATAATATACCGAAATGGTCCTTGGAATGGTGAGAGATTTAGTGGGATCCCAGGGATGAAAGACAACACCAATGATCTCAAGTACAATTTCACTTATGATGAGCATGGGGTGTGGTTCTCTTTCTCCGTTACAGAACCTTCCTTGTTGTCGAGGATAATTCTGTCATCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTCGTACACACCAAAGGATCCATGCGATTACTATAGACACTGTGGTCCGTATGGAGTGTGTGAGAATGATGCTTCCCCGATTTGCACTTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGTTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACGAGCAGTGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCAGAAACGGAGGAAGTGGCTGTGTCATGTGGTTTGGCCAACTCTTTGACATGAATGTCCACCGTCCAGGCGGTCAGGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTTCTAGCTCCAACAAGAATCATAGAGCAGTTCTGGCTATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGGTGACCAAAGGAACATGGATGATCTAAAATTGCCAATGTTTAATTTTGATACCTTAATGATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGTAGATTGATTGAAGGTCAAGAAATTGCTGTAAAAAGGTTATCAGAAAATTCTGGACAAGGAATTAACGAATTTAAAAATGAAATCAAATTAATTGCCAAACTCCAACATCGAAATCTAGTCCGATTACTTGGTTGCTGCATTGAGAAGAATGAAAAGATGGTGGTCTATGAATATATGAAAAATAGAGGACTTGATTCCATTTTGTTTGGTGAGCATTGTTTCTCTCAATATCTTGTTTGGAGGCGTTGGCACGAAGGAACTATATTGACTTTGATTGATCCATCCATGGGCAATTCATATACAGAATCAGAAATCTTAAGATGCATACATGTTGGTCTCTTATGTGTCCAAGAATGTGCAGAAGATAGACCAACAATGTCTTCGGTGATTTTAATGTTGAGTAGTGAAGCTGCATTAATGCCACGTCCTAGTAATCCAGGGTTTTTTCTAAGAAGAAATCATGCAGAAACATCTTCAAGAAATCAAGATAATACAGAAAGTGTAAATCAAGTTACTGTCACACTACTAAATGCTAGGTAG 2079 0.4132 MRVFFTHLNSLIIILISFFFFITSSTSLDTLTGTQILKTNQTLLSENQTFVLGFFRGSNTNYYLGIWYNNISPQTIVWVANRDNPIDNSAGHLKIGDNGNFVLLNSSGNPAWSSNQTNAKNPVIQLLDTGNLLLKDLSDTTNNNYLWQSFEYPTDTLLPGMKVGWNLDTGTEKHLTSWKVEGEDPSSGDYTLKIDYHGLPEALLRRNQTIIYRNGPWNGERFSGIPGMKDNTNDLKYNFTYDEHGVWFSFSVTEPSLLSRIILSSDSDGQYQRYMWIQGRWNKFSYTPKDPCDYYRHCGPYGVCENDASPICTCMQGFRPKNQEAWNLRDGSDGCVRNTVLNCSTDKFLHLENMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWFGQLFDMNVHRPGGQDLYVRLAAADIGSSSSNKNHRAVLAIGITLSALVLVLGLVAICYLRKKRQQSSRGDQRNMDDLKLPMFNFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAVKRLSENSGQGINEFKNEIKLIAKLQHRNLVRLLGCCIEKNEKMVVYEYMKNRGLDSILFGEHCFSQYLVWRRWHEGTILTLIDPSMGNSYTESEILRCIHVGLLCVQECAEDRPTMSSVILMLSSEAALMPRPSNPGFFLRRNHAETSSRNQDNTESVNQVTVTLLNAR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00375 692 Pfam D-mannose binding lectin 75 179 IPR001480 -
Adu10g00375 692 SUPERFAMILY Protein kinase-like (PK-like) 486 655 IPR011009 -
Adu10g00375 692 SMART ntp_6 343 422 IPR003609 -
Adu10g00375 692 Gene3D Hepatocyte Growth Factor 338 419 - -
Adu10g00375 692 PANTHER - 592 691 - -
Adu10g00375 692 PANTHER - 13 584 - -
Adu10g00375 692 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Adu10g00375 692 CDD B_lectin 34 153 IPR001480 -
Adu10g00375 692 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 592 691 - -
Adu10g00375 692 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 584 - -
Adu10g00375 692 Gene3D Phosphorylase Kinase; domain 1 457 571 - -
Adu10g00375 692 CDD PAN_AP_plant 339 423 - -
Adu10g00375 692 SMART blect_4 34 153 IPR001480 -
Adu10g00375 692 Gene3D - 23 150 IPR036426 -
Adu10g00375 692 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Adu10g00375 692 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Adu10g00375 692 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Adu10g00375 692 Pfam Protein tyrosine and serine/threonine kinase 498 581 IPR001245 GO:0004672|GO:0006468
Adu10g00375 692 Gene3D Transferase(Phosphotransferase) domain 1 577 658 - -
Adu10g00375 692 ProSiteProfiles Protein kinase domain profile. 496 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00375 692 Pfam PAN-like domain 343 408 IPR003609 -
Adu10g00375 692 Pfam Domain of unknown function (DUF3403) 648 692 IPR021820 GO:0004674
Adu10g00375 692 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Adu10g00375 692 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 219 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00375 Adu-Chr10 4416363 4419482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00375 594 679 Receptor kinase-like Gene Family AT4G23190 43.023 7.27e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu10g00375 PK_Tyr_Ser-Thr 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00375 - - aip:107621495 983.015