Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00353 ATGGGAAGAGCACCTTGTTGTGACAAAAATGGCCTCAAGAAAGGGCCATGGACTCCCGAGGAGGATCAAAAACTTATTGATTATATTCAAAAACATGGATATGGAAACTGGAGGACTCTCCCAAAGAATGCTGGGTTGCAAAGATGTGGAAAGAGTTGCCGTCTACGGTGGACAAACTATCTCCGGCCAGATATAAAGCGTGGTCGGTTCTCATTTGAAGAGGAAGAGACAATCATTCAACTACATAGCATTCTTGGCAACAAGTGGTCTGCGATTGCTTCTCGGCTACCAGGAAGAACGGATAATGAAATAAAGAATTATTGGAACACTTACATAAGGAAGAGGCTTCTGAGAATGGGAATTGATCCTGTGACACACAGTCCAAGACTTGATCTCCTGGATCTCACTTCCATTCTAAGCTCTTCTCTCTATGGAGATAATAATAATTCTTCACCAATCAACATCCAAAGGCTCCTTACCATGCACCCTATGGTGAACCCGCAGCTTCTCAAGTTAGCTTCCTCTATCATCACTTCTCAACAACATGATGAAAGCCTTGACTTCACTTCTTATCATAATAATCATTATGATAACCCTCAAATTCAGAACCAGAACCAAAACCAAACACAACAACAACAACAAGAAGAACAACACTTTGTTCAAACTCATCAAGAGCCGGTGACTTGTGTCTCATTGCCACCTTTCATTGAACCAAACAATAATAATAACAATGTGAACGCATACCCGTTCAATGGAATTGCTTTAAGTTCCTTAACAGAAGAAGATTATATCGTCCCTCAATTATCGAGCTATGATTATTATAGTTCTGATAATAATAATCTTCTAGTGGGTCCTTCATCATTGTCAGAAGCTTCAACAACCTTCCATTCAAGCCCCACAACGTTGAATTCGAACATCAATGGTAGCAGCAGCACCGAGGATGAGAGTAGTAGTGACAACATGTTGAGATTTCAAATCCCAGATGTTTTGGATGTCACTCAGTTTTGTGATAATAATGTTGTTTCAGATTATTATTATTATTAG 1044 0.3966 MGRAPCCDKNGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTYIRKRLLRMGIDPVTHSPRLDLLDLTSILSSSLYGDNNNSSPINIQRLLTMHPMVNPQLLKLASSIITSQQHDESLDFTSYHNNHYDNPQIQNQNQNQTQQQQQEEQHFVQTHQEPVTCVSLPPFIEPNNNNNNVNAYPFNGIALSSLTEEDYIVPQLSSYDYYSSDNNNLLVGPSSLSEASTTFHSSPTTLNSNINGSSSTEDESSSDNMLRFQIPDVLDVTQFCDNNVVSDYYYY 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00353 347 MobiDBLite consensus disorder prediction 189 220 - -
Adu10g00353 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Adu10g00353 347 CDD SANT 69 112 IPR001005 -
Adu10g00353 347 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu10g00353 347 CDD SANT 16 61 IPR001005 -
Adu10g00353 347 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu10g00353 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Adu10g00353 347 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu10g00353 347 Gene3D - 13 66 - -
Adu10g00353 347 SMART sant 66 114 IPR001005 -
Adu10g00353 347 SMART sant 13 63 IPR001005 -
Adu10g00353 347 Gene3D - 69 116 - -
Adu10g00353 347 MobiDBLite consensus disorder prediction 294 319 - -
Adu10g00353 347 PANTHER PROTEIN ODORANT1-LIKE 1 331 - -
Adu10g00353 347 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu10g00353 347 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Adu10g00353 347 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00353 Adu-Chr10 4079166 4080422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00353 1 335 MYB Transcription Factor Family AT4G21440 55.495 9.27e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu10g00353 Myb_DNA-binding 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00353 K09422 - gmx:102660551 379.793