Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00348 ATGCAAGGTTGCATTGGTGTGGTCCATTTATCTATCTACAACTCTCTGATCATCAAGTTTTGCTTCCTTGCATTAAAAGCACAGCAAAATAACTACTTCAACGAATTAATGCAACAAGATTCCACAACCACCGTCGTTTCGCCGGAAAATGGCTTTGTTGCACCACAACCACTGACAACTCCAGCTATTATGGGCTACGATGAACAACTCAAACCGTGCCGGAATAACTTGCCGGAATCCTCCAATCCCCGGCGAGTCGTCAACCTTATTTCATCCCTAATCTCCCTCTCCCTCTCGATTAGGGTCTTCGCCGGAAAATGGCAACTGATTCGCAACAAGCTCGAGGAGCTGTACTCCGGTCTAGTCGGAGCCGACGACGACCCTTCACTCTCCGGCGTTCTCCCTGCGATCCTCTCCACCGCGGAGGAGTGTTCCGACCTAGCTCGCCGCTGCACCGATCTGACATACAGCGGGAAGCTTCTTATGCAGAGCGACTTAGAGGTGGTTTTCGCGAAGCTCCATTGCCATGTGAAGAAGCTGTCTGAGATGTACACGAAGGGTGTTCTCACACACAGCTACGCTCTGGTGGTCTCGAAGCCTGGACTTGGAGCTTCCAAAGAGGACATGAGGTTCTTCGTGAGGGACCTACTCACCAGAATGAAGGTTGGCGATGTTGGTATGAAGAAGCAGGCATTGATCAACCTCCACGAAGTTGCTTCCGAAGACGACAAGTACGTGAAGGTGATTGTTGAAGTCGGTGACGTTGTTCATGTTCTGGTTGATTTTCTAGGGTCCTCTGAGTTGGAGATTCAACAAGAGTCTGCAAAGGTAGTTTCTTTGATTGCGGGGTTTGATTCTTATAAAGGAGTTCTTGTTGGCGCTGGCGTTGTTGCGCCTTTGGTTAAGGTTTTGGAGTGTTCAAGTGAGACTGGCAAAGTTGCTGCTGCCTTGTGTCTGCAGAGTTTGACTGAGAATTCCGATAATGCTTGGTCGGTTTCCGCTCACGGCGGCGTGACGGCGTTGTTGAAGATTTGTGGCGGTGTAGATTGCAGAGCAGAATTGGTTTGTCCTGCTTGTGGAGTTCTGAGGAATCTGGTTGGTGTTGAAGAGATTAAGAGGTTCATGGTTGATGAAGGTGCGGTTTCAAGCTTCATTAGGCTTATGAGGTCAAGGGACGAAGCGATTCAGGTGAGTTCCATTGAGTTTCTTCAGAGTATTGCATCCGGAGATGAGTCATTGGTTAAGCAGATTGTTGTTAGAGAAGGGGGGGTTCGTGTTTTGCTGCGACTTTTGGATCCTAAATGGCCTTGTTCTTCCAAAACAAGAGAGGTAGTGATGAGGGCTATTGAGAATTTGTTCTTCTCTTGGTCTAGTTGTGTCACTATTTTGATGAGCTATGGTTTTGTGGATCAATTGATGTACTATATTCGAAACGGCGACGTTTCTGTTCAAGAATTGGCTCTCAAAGTGGCGTTTAGATTGTGTGGAACATGTGAAGATGCTAAGAAAGCTCTAGGTGATGCTGGATTCATGGCAGAGCTTGTTAAGTTTCTAAATGTGAAATCATTCGAGGTTCGAGAAATGGCGGCGGAGGCACTCTCCGGGATGGTTATGGTTGCCAAGAACAGGAAGAGGTTTGTGCAAGATGATGAAAGCATTGCTCTTCTTCTGCAGTTGTTGGATCCAGAGGAGGGGAATTCAGGTAACAACAAGTTCTTGATCTCTGTATTGATGTCATTGACGCATTGCAACAGTGGGAGGAAGAAGATTGTGAGTTCTGGGTATGCAAAGAACATAGAGAGGCTTGCATCAGAATCTCAAGTTTCTTCTGCTGACGCAAAGAGACTTGTCAGGAAGCTATCCACCAATACATTCCGCACCATGCTCAGTGGAATCTGGCACCACCACCACCACCACCACTCTTGA 1926 0.474 MQGCIGVVHLSIYNSLIIKFCFLALKAQQNNYFNELMQQDSTTTVVSPENGFVAPQPLTTPAIMGYDEQLKPCRNNLPESSNPRRVVNLISSLISLSLSIRVFAGKWQLIRNKLEELYSGLVGADDDPSLSGVLPAILSTAEECSDLARRCTDLTYSGKLLMQSDLEVVFAKLHCHVKKLSEMYTKGVLTHSYALVVSKPGLGASKEDMRFFVRDLLTRMKVGDVGMKKQALINLHEVASEDDKYVKVIVEVGDVVHVLVDFLGSSELEIQQESAKVVSLIAGFDSYKGVLVGAGVVAPLVKVLECSSETGKVAAALCLQSLTENSDNAWSVSAHGGVTALLKICGGVDCRAELVCPACGVLRNLVGVEEIKRFMVDEGAVSSFIRLMRSRDEAIQVSSIEFLQSIASGDESLVKQIVVREGGVRVLLRLLDPKWPCSSKTREVVMRAIENLFFSWSSCVTILMSYGFVDQLMYYIRNGDVSVQELALKVAFRLCGTCEDAKKALGDAGFMAELVKFLNVKSFEVREMAAEALSGMVMVAKNRKRFVQDDESIALLLQLLDPEEGNSGNNKFLISVLMSLTHCNSGRKKIVSSGYAKNIERLASESQVSSADAKRLVRKLSTNTFRTMLSGIWHHHHHHHS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00348 641 Gene3D - 212 641 IPR011989 -
Adu10g00348 641 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 336 380 IPR000225 GO:0005515
Adu10g00348 641 SMART arm_5 410 454 IPR000225 GO:0005515
Adu10g00348 641 SMART arm_5 325 367 IPR000225 GO:0005515
Adu10g00348 641 SMART arm_5 368 408 IPR000225 GO:0005515
Adu10g00348 641 SMART arm_5 284 324 IPR000225 GO:0005515
Adu10g00348 641 SMART arm_5 498 538 IPR000225 GO:0005515
Adu10g00348 641 SMART arm_5 242 283 IPR000225 GO:0005515
Adu10g00348 641 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 76 634 - -
Adu10g00348 641 SUPERFAMILY ARM repeat 206 604 IPR016024 -
Adu10g00348 641 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 76 634 - -
Adu10g00348 641 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 379 423 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00348 Adu-Chr10 4061170 4064514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00348 213 487 U-box Gene Family AT2G23140 24.731 1.94e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00348 - - gmx:100783537 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03326 03 119849200 119851572 Adu10g00348 10 4061170 4064514 PCT