Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00344 ATGGCTTCCACAAAGCGCCAACTGTCGGAGGAGTGGATACCGAACTCCACGAACACGATGACCCCTCATCATTTCGTTTCTTCTCCTCGCGTTGTTCTCAATCAAGCTGATTGCGACTTGGATTTCAATGTGGAATCCGATGGACTTGTTGGATATGGACTTCATGATCAGGGGTTTGCTTATTGTTGGTCTGGTGCCCGAGCTAACGTTGGAATAACCAGAGGAAGATATTGTTTTGGGTGCAAAATTGTTTCTTTGCAGCAGGTTCCAATGGAGGACACCGACTTTGAGGAGCGGCATATTTGCCGGCTTGGTATATCTAGAGGGGATGATATGCTTGGGGAACTTGGGGAGACCAAATACAGCTTCGGATATGATGGGACAGGAAAGTTTTCACATGAAGAAAAATCTTCAGATTATGGTAAGAGGTTTGGTGTTGGTGATACAATAGTATGCTGTATTGACCTTGAAGGCAAGCCAATGGCTTCAATTGGTTTCTCCAAGAATGGTAAATGGTTTGGAACTGCACTCCATTTTTTCCCTAGTCCTTTAGGTCTTGGAGTGGTGGATTCTCCCCTGGAAGATTTTCAGTGGAAATCAGCACTTTTTCCACATGTGCTGTTAAAAAATGTGGTGGTTAAGATGCAGTTCAGCCTTGAAGATGGACTTGTTCCTCAAGAAGGGTTCAAACCTTGGGCCTCTGCTATTGAGGACAGAAACATCATCATGGGACCTGCCTTTTCTGATCAAAGCAATTGTGAAGTGATAATGATGGTGGGTTTGCCTGCTTCAGGGAAGACTACATGGGCAGAAAAATGGGTGGAAGAGCATCCAGAAAAGCGTTATGTTTTGCTTGGAACAAAGTTGATTCTTGATCAGATGAAGTTGAACGACTGTGGTGAAAGATTTGATCGCTTGATGGATCAAGTAACCGGAGTATTCAATGTGCTGCTAACGAGAGCAGCTATTATTCCTCGCAATTATATAATTGATCAAACAAATGTTCACAAAAATGCACGTAAGCATAAGCTCAAGCCATTTGCTGACTATCAAAAGATTGCTGTTGTTGTATTTCCAAAGCCAGAAGAGCTCAAGGTGCGGTGTGATAAACGATTCAAAGAAACCGGAAAAAAAGTGCCACCTGATTCTCTGAAAAACATGATTGCTAACTATGTTCTTCCAAAAAGCATGGATATGCCTAATTCAGATGAGTATTTTGATCAGGTTAAGTTTGTAGAACTGAACCGAGATGAGTCTCAGATGTATTTAGATCAGATGAAGCAGGATCGTACATCTATATCAAACACTAGTTCATCGCAATTACAGTGCAGTGATTCCTTTCATTCACTTGCTGGTTCTCCTTTGCAAAACCAAGAAAGTTTTACAGGTTTTTTTAATCATGGACAAGGCATTCATTCTCAAATCCATCCATCCAACTACTGGATGCCCAGTCAACATCATGGAAGTATGAATTCATTTTCCGAAGTATATCCAGGCAGTCAAATTCCCCCTGTACCCCGAGCACCCTCTCCTTGTGGACGTTATCCCATTAACAGAAACGAAGCGAATGAAGCCTTCCCAATTTCAAATGCAGCTACGATGCCTTTTGATTATCATAGATCCTACAATGACAACAGCGGTTTCCAGCGCCACCTGCAAACTCCATCCTCAGCCACACCCGATTCAGTTTCCCCATTCGGGATACCAAAACCAAGTTCAAGACCTCCAGATCTCTCCCCACAGGTAGAGCATCGGGCTTTCACCTCCGAAGAAGACGACACCATAATCAAATCTCACGCTCGGTTCGGCAACAAGTGGGTCATCATAGTCCGACTCCTTTTCGTTAGAACCGACAATGCCATTAAGAACCACTGGAACTCCACCCTCAAACGCAAGTGTACCTCCATGGACCACATCAACGATTTTCACTTCACGCAGCCACTCAAACGTTCCGTTAGCGCCGGCGCCGCCATACTCGTGTCAATGGTGGTGGTGAGGTACTCGTTGCCGATGGTGATGGCGACGACGGAGATGACGGACAGGAAAGGGAGGATGCGGATGGAGAGCCAAGAGTGTGCAGTAGAGATGTCGGAGTTGATGTTGGCGACGCGGAAGTTCTCAAGGGAGACAATGAAATCAATGGCGGTGTTGGAGAAAGCTTGGAGGATTCAGGGTTAG 2178 0.4486 MASTKRQLSEEWIPNSTNTMTPHHFVSSPRVVLNQADCDLDFNVESDGLVGYGLHDQGFAYCWSGARANVGITRGRYCFGCKIVSLQQVPMEDTDFEERHICRLGISRGDDMLGELGETKYSFGYDGTGKFSHEEKSSDYGKRFGVGDTIVCCIDLEGKPMASIGFSKNGKWFGTALHFFPSPLGLGVVDSPLEDFQWKSALFPHVLLKNVVVKMQFSLEDGLVPQEGFKPWASAIEDRNIIMGPAFSDQSNCEVIMMVGLPASGKTTWAEKWVEEHPEKRYVLLGTKLILDQMKLNDCGERFDRLMDQVTGVFNVLLTRAAIIPRNYIIDQTNVHKNARKHKLKPFADYQKIAVVVFPKPEELKVRCDKRFKETGKKVPPDSLKNMIANYVLPKSMDMPNSDEYFDQVKFVELNRDESQMYLDQMKQDRTSISNTSSSQLQCSDSFHSLAGSPLQNQESFTGFFNHGQGIHSQIHPSNYWMPSQHHGSMNSFSEVYPGSQIPPVPRAPSPCGRYPINRNEANEAFPISNAATMPFDYHRSYNDNSGFQRHLQTPSSATPDSVSPFGIPKPSSRPPDLSPQVEHRAFTSEEDDTIIKSHARFGNKWVIIVRLLFVRTDNAIKNHWNSTLKRKCTSMDHINDFHFTQPLKRSVSAGAAILVSMVVVRYSLPMVMATTEMTDRKGRMRMESQECAVEMSELMLATRKFSRETMKSMAVLEKAWRIQG 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00344 725 Gene3D - 250 426 IPR027417 -
Adu10g00344 725 SUPERFAMILY Homeodomain-like 578 635 IPR009057 -
Adu10g00344 725 MobiDBLite consensus disorder prediction 544 581 - -
Adu10g00344 725 CDD SPRY_hnRNP 31 218 IPR035778 -
Adu10g00344 725 SMART sant 583 631 IPR001005 -
Adu10g00344 725 SMART SPRY_3 74 221 IPR003877 GO:0005515
Adu10g00344 725 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 178 IPR013320 -
Adu10g00344 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 398 IPR027417 -
Adu10g00344 725 Pfam AAA domain 255 393 - -
Adu10g00344 725 Gene3D - 586 650 - -
Adu10g00344 725 ProSiteProfiles Myb-like domain profile. 579 629 IPR001005 -
Adu10g00344 725 Gene3D - 28 249 IPR043136 -
Adu10g00344 725 Pfam Myb-like DNA-binding domain 586 628 IPR001005 -
Adu10g00344 725 CDD SANT 586 629 IPR001005 -
Adu10g00344 725 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U 24 492 - -
Adu10g00344 725 Pfam SPRY domain 102 178 IPR003877 GO:0005515
Adu10g00344 725 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 579 633 IPR017930 -
Adu10g00344 725 MobiDBLite consensus disorder prediction 544 563 - -
Adu10g00344 725 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER 24 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00344 Adu-Chr10 3972970 3979799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00344 578 662 MYB Transcription Factor Family AT4G37260 56.842 8.31e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu10g00344 AAA_33 4.1e-22 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00344 K15047 - gmx:100803180 689.108