Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00342 ATGCAAACGACGTACTTGGAGAGATCAAGGGAGAAGCGAAGTTTGGATTCAACCTCCGCTGATGAAGATGAACCTCAAAAGAAGAGGCCTGCGTTGGCCAGTGTAATTGTTGAAGCCCTGAAGGTGGACTGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATCCTACGTAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAACTAGGCACTGCCAAGCTTAGTGGGAGGACTTCTCCTAAGCAAATAGAAGGTCATGATGTTGGCAATTTACAATTACAATTCAAGACCAGGTTATCTCTTCCTCTCTTTACCGGTGGGAAAGTGGAGGGAGAGCAGGGCACAGCCATACATATTGTCCTGGTTGATGCAAGCACAGGCCATATTGTGACATCTGGTCCAGAGTCATGTGTAAAATTAGATGTTATTGTGCTTGAAGGGGATTTCAATAATGATGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGTCATGTTGTGAAAGAGCGAGAAGGAAAGAGACCTCTTTTGACTGGTGACCTGCAAGTGATACTGCAGGATGGTGTAGGTACATTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGGCTCAAAGTTTCCTCAGATTGTAATGAGGGAAAGCGGATTCGTGAAGCCAAAACAGAAGCTTTCACTGTTAAAGATCACCGGGGAGAATTATACAAGAAACACTATCCACCTGCCCTGAATGATGAGGTCTGGAGACTGGAGAAGATCGGCAAGGATGGGTCCTTTCACAAAAGGTTAAATAGAGCAGGAATATTTACTGTTGAAGATGTCCTAAGACTTGTGGTTAAAGACCCACAGAGGTTGCGAAATATTCTTGGGAGTGGCATGTCAAATAAAATGTGGGATGTCCTCATTGAACATGCAAAGACTTGTGTTCTCAGCGGAAAACTTTATGTGTACTATCCTGATGATGCAAGGAGTGTTGGTGTTGTTTTCAATAACATCTACGAGTTGAGTGGCTTAATAGCCAATGATCAATACTACTCGGCTGATTCTCTCTCTGATAGTCAAAAAGTATATGTGGACACATTGGTGAAGATGGCATATGAAAATTGGATGCATGTAATTGAGTATGATGGCAAGTCTCTCCTAAATTACACTCAGAATACATCGGGCACTGCTCAACTTCAACATCTAATGGATTCCCATAATGATTCAAATTCAAACTTGCTTGATCACCAGACCTCCTTCCCAAATTCACCTGTTCCTGTACCTACAAGGCAACCTTCGATGGATCCAGGAGTAACATTTGCAGGTTATCATGATAGTGCTGCTACTAGATTCTCAATGCAACCGCAGAATGCTAATCTTAGTTCTTCAATGCAGTACGATAAGACAATGTTCCCACAACCAAACCAAATGATGAGTGCTTCACACCATGCTCAACTTCTAAGAAATGGTCCAACACAAATAGACACTCCTGGCTTACACACTAATGGCATTTCTAATCCTAGTTATAGAGGATGTGAAGATTACTTTCCAGCGGAGGAGATTAGAAGCAGAAGTCACGAGATGCTAGAGAATGAAGATATGCAGCATCTGCTACGCATTTTTAATATGGGTGGCCAACCCCGCACTCCCTTAAATGCCGAAGATGGATACCCTTATTTATCTAACTACATGCCTACAGACTCCATGAGCTACAACTTTGACAATGGGCAGAACCGTTCGTCAGGAAAGGCCGTCGTGGGCTGGCTAAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAAGGCAGCCGAGAGGCGGGCTCAGCTCGTTGAGTTGGATGACCTCTAG 1869 0.435 MQTTYLERSREKRSLDSTSADEDEPQKKRPALASVIVEALKVDCLQKLCSSLEPILRRVVSEEVERALAKLGTAKLSGRTSPKQIEGHDVGNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLVDASTGHIVTSGPESCVKLDVIVLEGDFNNDDDDNWSEEEFESHVVKEREGKRPLLTGDLQVILQDGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCNEGKRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNRAGIFTVEDVLRLVVKDPQRLRNILGSGMSNKMWDVLIEHAKTCVLSGKLYVYYPDDARSVGVVFNNIYELSGLIANDQYYSADSLSDSQKVYVDTLVKMAYENWMHVIEYDGKSLLNYTQNTSGTAQLQHLMDSHNDSNSNLLDHQTSFPNSPVPVPTRQPSMDPGVTFAGYHDSAATRFSMQPQNANLSSSMQYDKTMFPQPNQMMSASHHAQLLRNGPTQIDTPGLHTNGISNPSYRGCEDYFPAEEIRSRSHEMLENEDMQHLLRIFNMGGQPRTPLNAEDGYPYLSNYMPTDSMSYNFDNGQNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDL 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00342 622 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Adu10g00342 622 MobiDBLite consensus disorder prediction 1 28 - -
Adu10g00342 622 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Adu10g00342 622 Pfam Calmodulin binding protein C-terminal domain 323 385 IPR046829 -
Adu10g00342 622 PANTHER CALMODULIN-BINDING PROTEIN 6 620 - -
Adu10g00342 622 PANTHER OS02G0177800 PROTEIN 6 620 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00342 Adu-Chr10 3949354 3953996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00342 1 621 Calmodulin-binding Proteins AT2G18750 59.505 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00342 - - gmx:100802994 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03337 03 120042530 120047563 Adu10g00342 10 3949354 3953996 PCT