Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00330 ATGGGTGTGGAAGTGCCACTACATCATTTCCCTATAGTTACAGGGGACGGCTTGCGGAATAGAAGCATTGAAAATAAAGCTGTGATTGTTAGTGAAGGGGAGAAGAATGTTTGGCCAGCAATTGCAGAAGGAAAGCTGAAGATCATCAATTCTTATCAGATCCAGCAGCGACAGTTTGAACTCACAAGTGAGGCTTTTCCTGAAAGTGCAAGATATATATTTGATTTTGAAATGGCTATTAACATCGTTGGTGCGATCACGGGCGTTATGAGCTGCCTCTGTACACAGAACTGTCTTCAAGAATCACTTGGTCATCATATTAGACACCTTAGAAGACCCAAAAGGAATTTGAACAAGCTCAAGTCATTGTTGGAGGAGCTAGATGCCCGGAAAGTTGACATGTGTGCCAAGCTAAATCAAATGTGGCTTCAAAAAGGGATGAATCCAAAGAAAGAAGTGGAATTGTGGCTGAAAAATGTTGATGAGATTGCAAATGAAGTAAATAAGATCATAAGGGAAGTTGAACAAGAAAGTGGAAGCACAAGTGTTCTCTCTCCATTTTATTATAGTTCAAGAATAAAGAGAGGAGAACTTATTGAGAAAAAAATGGAGGAGGTGAGAGAGCTTCTAGAGAAAGGTCGATTTGCAGATGATTCATTGGCTGAAACTTCTCCTCAAAAAGGGCAAACCCTTCCAACAACAAAGCTAATGGAACACGAAACAACAATGAAAAACTTGACCAAGATTTTGAACTTCATATTGGATGATAGAGTGAGAATTATTGGTGTTCATGGGATGGGCGGAGTGGGGAAAACAACTATTATGGCTGAAATTAACAATAGACTATTGAGGGAAAATAGACTATTTGACAGTGTTATTTGGGTTAGTTCCTCAAAGGACATGAAAACTGAGGAGTTACAAAAGGTTATTGCAGGTAAGTTTGATATAGACCTTTCAGGATTTCAGGATGAGACTTCAAGAGCTGCCACACTGTTTGAAGCTTTCCAAAGAAGGAAGAAGTTTGCCTTGATTCTGGATGATCTATGGGAGCCATTCTCTCTTGAAAGAGTTGGAATACCAATACCAACTGTGGAGAACGGTTGCAAACTGCTAATAACTACTCGAAGGGTAAGCGTTTGCCGAGGCATGGAAACAGATAGAGATGTCAAAGTAAAGGCTCTTACAGAAAATGAAGCATGGGATCTCTTCAGGGACAAAGTTGGGGATGAAGCATTGGCCTCTCCGGACATCAAACTGATTGCAAAAGATGTGGCAAAAGAATGCATGGGATTACCTCTTGGTATTGTTACCGTGGGGCGTGCCTTGAGAAATGCAACTGATATTTCAGAATGGCAGATTTCATTGATGGGGTTAAAAGCTTCAGCTCTCAACATAGAACAAATGGAAGAATCTGTTTTTTCTCGTTTGAAATTCAGCTTGACAAAATTGAAGGATGACACAAGTAGGTCCTGTTTTCTATATTGTGCTCTCTATCCTGAAGGTAATCATGTTGATGCAAATGAATTGATTGAGTATTGGATGTGGGAAGGTTTATTAGGTGCTGTGGATAGCATTTCAGCAAGCAAACAGAAGGGGAAAATCATATTGAATGAACTAAAATATGCATGCTTGTTGGAAAATGCTGCAGACAATGAGATGGAATGTGTCAAAATGCATGACTTAATACGAGATATGGCCTTGACAATCATGAAAACAGATCCTCGATGGCGCTGCATTGTCAAAGCTGGCAACAAATTGAAGAAACCTCCCCAAATTGATGAATGGACAGAAGATGCTCTAAGGGTGTCATTGATGAAAAATGATCTGAATAATATCTTTCTTGGCAATCCTCCATCATGTCCAGCTGTTACTTCCCTGTTATTGCAATACAACTCTTTCTCTCAAAATATACCTTATGACTTCTTTGATTTCATGCAAAGCCTAAAGGTTCTTGATCTCTCTTACACTGGGATCCATGTGCTGCCGGGTTCGGTTTCTAACTTAGAGAATCTATGTGCCTTATTATTGAGCAATTGCTGGAATTTGAAATTGATCCCTTCTGTGGCAAAACTCACTAAGTTGATGGTTCTCGACCTTTCGGGTTGCCGAAACATAAAGCAACTTCCCCATGGGACAGAACAGCTATGCAACCTGAGAAGGCTAAATATTTCCAATACCATGATTAACATCTTGCCATCTGGTTTTCTCTCAGCATTAACCCTTCTAGAGGAGTTATTAGCATCTAATGCTCTCGTCTTTCAAAAAACATTGCCACTGAGCGTTTCTGAAATCAGCATTGGTGAAATCATATCCTCCTCAAGATTATCATCTCTTGAAGTGGATTTCTGGCACTGTGATCTCTATAATCTGTATGCTTGCTCTGGTCACTGTGCTCAGCTAGAGAAGTTCAAGTTCAATGTTGGACCAGGAGAAATCCAAGAATTTTCGGAGAAATGGAGTGTGGCATTTCTCAGCATATCCATTGCCAAAGAGGAAATTTCAATCCCAGCAAATACTATCGAGTTGAAGTTTATTGACTGCTATGATATCACAGAGTTAACTACTTGCCTTTTGCATGTAGAGAAGCTCAAGAAATGCACAGTAGTTTGCTGTTACAGTGTAGAAAGAATTGTTGACACTGAGCAGATTGATTTATCTATGCTGGAGACTTTGGTGCTGAGATATTTGATCAATTTGCAGATGATATGTAGGGAAGTGATGACTTCATCTGCATTTATGAGATTAAAGATCATAAATGTAGAATTTTGTCCAAATTTGAAGAGCCTATTCTCAGGGAACCTTTTGCTTCAACTGTCAAATCTTGAAGAAATTAGAGTCGGCCACTGCAACAAGATGGAGGATTTGATGAGATGGGAAGGAGGGGGAAGAAACAGTAATGACATTCATGCTGCCAAAATTCACTTGCCTAGATTAAGGAAATTGAGGTTGGAGTTCATGCCAAATTTAAAAGGAATATATGATGGATTCATGAGTTATGGCTCTCCATGCTCTTTTGAAGTAGTTTCTTGTGATGCACTGAAGAGATTACCCTTTGATCTTGATGAATTAGTAGGCCTTAACCAGCAACTATTGTCACCGCATGCTTTGGAAATCAAAGGAGCAAAGTGTTGGTGGGATTCACTTGAGTGGGATGAACCTGATGCCAAGCAAATAATGCAGACATATTTCATAGAGATGCCAAGGGTGCTGGGTGAAGTGGCAAGATCTTATTGGTTCACGTGTGACCCAATCTTTACACCACGAAGCACAGCAACATTTGGCCAAGAGAGAAGTAGTTGTTGGACTGGGGAGCCTTTGAGGTCAGTCAAAGTTACAAACGAGTTCGATCATTCTTCAGCTTCAGCTTCAGCTTCAACTTCCATCCAACTAAGGTTCTAG 3399 0.4007 MGVEVPLHHFPIVTGDGLRNRSIENKAVIVSEGEKNVWPAIAEGKLKIINSYQIQQRQFELTSEAFPESARYIFDFEMAINIVGAITGVMSCLCTQNCLQESLGHHIRHLRRPKRNLNKLKSLLEELDARKVDMCAKLNQMWLQKGMNPKKEVELWLKNVDEIANEVNKIIREVEQESGSTSVLSPFYYSSRIKRGELIEKKMEEVRELLEKGRFADDSLAETSPQKGQTLPTTKLMEHETTMKNLTKILNFILDDRVRIIGVHGMGGVGKTTIMAEINNRLLRENRLFDSVIWVSSSKDMKTEELQKVIAGKFDIDLSGFQDETSRAATLFEAFQRRKKFALILDDLWEPFSLERVGIPIPTVENGCKLLITTRRVSVCRGMETDRDVKVKALTENEAWDLFRDKVGDEALASPDIKLIAKDVAKECMGLPLGIVTVGRALRNATDISEWQISLMGLKASALNIEQMEESVFSRLKFSLTKLKDDTSRSCFLYCALYPEGNHVDANELIEYWMWEGLLGAVDSISASKQKGKIILNELKYACLLENAADNEMECVKMHDLIRDMALTIMKTDPRWRCIVKAGNKLKKPPQIDEWTEDALRVSLMKNDLNNIFLGNPPSCPAVTSLLLQYNSFSQNIPYDFFDFMQSLKVLDLSYTGIHVLPGSVSNLENLCALLLSNCWNLKLIPSVAKLTKLMVLDLSGCRNIKQLPHGTEQLCNLRRLNISNTMINILPSGFLSALTLLEELLASNALVFQKTLPLSVSEISIGEIISSSRLSSLEVDFWHCDLYNLYACSGHCAQLEKFKFNVGPGEIQEFSEKWSVAFLSISIAKEEISIPANTIELKFIDCYDITELTTCLLHVEKLKKCTVVCCYSVERIVDTEQIDLSMLETLVLRYLINLQMICREVMTSSAFMRLKIINVEFCPNLKSLFSGNLLLQLSNLEEIRVGHCNKMEDLMRWEGGGRNSNDIHAAKIHLPRLRKLRLEFMPNLKGIYDGFMSYGSPCSFEVVSCDALKRLPFDLDELVGLNQQLLSPHALEIKGAKCWWDSLEWDEPDAKQIMQTYFIEMPRVLGEVARSYWFTCDPIFTPRSTATFGQERSSCWTGEPLRSVKVTNEFDHSSASASASTSIQLRF 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00330 1132 Pfam NB-ARC domain 246 480 IPR002182 GO:0043531
Adu10g00330 1132 Pfam Leucine rich repeat 622 679 IPR001611 GO:0005515
Adu10g00330 1132 Gene3D - 219 390 IPR027417 -
Adu10g00330 1132 Gene3D - 393 476 IPR042197 -
Adu10g00330 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 495 IPR027417 -
Adu10g00330 1132 Gene3D Ribonuclease Inhibitor 573 827 IPR032675 -
Adu10g00330 1132 SUPERFAMILY L domain-like 553 1019 - -
Adu10g00330 1132 PANTHER OS12G0491200 PROTEIN 102 1027 - -
Adu10g00330 1132 Gene3D Ribonuclease Inhibitor 915 1037 IPR032675 -
Adu10g00330 1132 Gene3D - 477 568 IPR036388 -
Adu10g00330 1132 PRINTS Disease resistance protein signature 260 275 - -
Adu10g00330 1132 PRINTS Disease resistance protein signature 428 442 - -
Adu10g00330 1132 PRINTS Disease resistance protein signature 689 705 - -
Adu10g00330 1132 PRINTS Disease resistance protein signature 335 349 - -
Adu10g00330 1132 PANTHER DISEASE RESISTANCE PROTEIN RP 102 1027 IPR044974 GO:0006952
Adu10g00330 1132 Coils Coil 157 177 - -
Adu10g00330 1132 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00330 Adu-Chr10 3847411 3854366 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00330 258 732 WRKY Transcription Factor Family AT5G45050 22.857 7.42e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00330 - K13459 aprc:113852063 910.983