Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00301 ATGCATTCATGGCGAAACGAGCTAATTTCCATGGGTGACAGTCAAACGAGCTACTTCCATAGGTGCAGCTTCTTCTTGAAGACTACTGACATCTCAGTTACCAAATTAAAGAGTACAAAGGCATTTGTCTATACTGTTCTGGTAATTGCTCTAATGGGAGATAGAAGAGCTGATAAGCCAATGAATATGCCGAAAAGATTGAGTACTGCGAGTTCTACTCTCTTGACCTGGCTTGTCGGACGCTGTTTGTTTTCTAACATAATCATGGAAGATCAGTTTTTCTCTGAGGGAGAGGGAATTGGGTATTGGACACCTCCTGGCGCTCAATTCGATGGACCAAGCATGATAGACAACGGAATAAAAAATCTTGTATCAGAGGAGATGCTTGACAACCTCCCTGATCTCATGAACTTCGATAACCTTGCTGGTTGGGGTAATATTCCATCTGTGACTGATCATAATTTAGATAATGAAATTTCATCACTTGCCTCTATGCAGTATTCTCCACCTGATGCATTCAGTTTAGTGGAACAGGACAATGATCCATACTTTATGACAAAAGATTGTGGAAATTATAATGCTACTGAAACCTCCTTGGGTTTCGATGAGAAGGCTGTGTTACAGCAATTGGAGACCCAACTTGGGTTGTCAGAAGATGCAAATGATATAAATAACATAAATGGATCACTTCAAGAATTGAGTGCTGCTGACATGGGAAATTGCTTGGTGCCTAGACCATTTGCTTGGTCGCTTGATGAGAGAATGCTGAGGGCTATGGACTTGTTTAAGGAATCAGTTGGTGATGGAATATTGACACAACTTGTTAATTTAAGGACTACTACGCCTCCAAGACTTATGTCCCAGTGTCTATCAAATAACAAAAGAGCAGCTTTAACAGAGATAATTGATGTGTTGCGAGCTTTGTGTCATGCATATAGTTTGCCACTGGCATTGACATGGATCCCCTGTTGTTATACTGAGGGAGTAGGAGATGAAGCTTCAAGAATACGGATTAAAGATGGCGGTAGAATTCCTGGTGAAAAAACTGTACTATGCATTGAAGAATCAGCTTGCTATATAAATGATATTGTGGTAGGAGGATTTGTTCATGCATGTGTTGAACATTATCTCGAGGAAGGGCAAGGTGTAGCTGGGAAAGCTCTTCAATCAAATCGACCATTCTTCTATTCCGATGTGAAGGCCTATAATATTAGTGCATATCCCCTTGTTCACCATGCGCGAAAATATAAGTTGAATGCTGCCGTTGCAGTCAGGCTAAGGAGTATTCATACCAATGATGATGATTACATAATAGAATTCTTTCTACCTGTCAATATGAATGGAAGTGAAGAACAGCAACTTTTATTAAACAATCTATCAGATACTATGCAGAGAATGTGTCAGAGTTTGAGGACAGTTTCGGATGCTGAATTATACGGGATAGAAGGTTCGCAAGTGCAGTTTTCAAAGGAAGAAGGCTCTCATATGGCACCGGATGGTGACCATGATTCGGTCATGCCTATGTCATTGACAAACAATGAAACTGAAGCTGCTCATAACCAGGCAATGGATGGATCAAGAAAGCAGATTGAGAAAAAGAAAAGTCCAGCGGAGAAGAATATTAGCTTGAGTGTTCTCCAGCAATATTTCTCCGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGGTGTTTGCCCAACAACCCTGAAAAAGATATGCAGGCAACACGGAATTTCAAGATGGCCATCGCGCAAGATCAATAAAGTTAATCGTTCGTTAAAAAAAATACAAACCGTGCTTGACTCAGTCAAGGGTGTGGAAGGAGGACTGAAGTTTGATCCTTACAAGGGGGGATTTATGTCGGGAGGATCAAGCAACCAAGAAATTAATGCACATAAAAGTTCTCTCTTCCGGAAGAAATGTTCTGTAAAATATCCTGATCCTGCAGCTGGTAGCAAAGATTCAAAGCCAATAGCCATGGATGATGGTGGATTACGGCAGGAACCCTTTCCGGTTTCTATTTTGGAAAGTTCTTGGTGTGATATAGCATATCACAGTCCAAACACCCTGGTTGCCGATGAGATGGCTGACAAGCTCGGCGAGCATCACAATCCCACTACTTCAAGCATGTCAGACTCGTCGAATGGCTTTGGCTCAATTTTGCGTGGCTCTCGGAAATTTGAGAATCGGAAACATTTGAAAGCCAAATCACCTTGTGTTGATAATGGATCAAAACTTGTTGTCAAAGCTGCCTACGGAGAAGATAGGATCCGTTTCAAGTTTGATCCTGCAGCTGGCTGTCTCCAGCTCTATGAAGAAGTTGCAACAAGATTCAAATTACAAATCGGATCTTTCCAGCTCAAGTATCTCGACGATGACGAGGAATGGGTGAGGATGGTAAATGACTCAGATTTGAAAGAATGCATGGAAATATTGGATGATCATGGCACCCGTGCTGTGAAATTTCTTGTTCTCGACATCCCTAGTGGTTTGAGCAGCCGTGGCAGTAACACTTGA 2514 0.4169 MHSWRNELISMGDSQTSYFHRCSFFLKTTDISVTKLKSTKAFVYTVLVIALMGDRRADKPMNMPKRLSTASSTLLTWLVGRCLFSNIIMEDQFFSEGEGIGYWTPPGAQFDGPSMIDNGIKNLVSEEMLDNLPDLMNFDNLAGWGNIPSVTDHNLDNEISSLASMQYSPPDAFSLVEQDNDPYFMTKDCGNYNATETSLGFDEKAVLQQLETQLGLSEDANDINNINGSLQELSAADMGNCLVPRPFAWSLDERMLRAMDLFKESVGDGILTQLVNLRTTTPPRLMSQCLSNNKRAALTEIIDVLRALCHAYSLPLALTWIPCCYTEGVGDEASRIRIKDGGRIPGEKTVLCIEESACYINDIVVGGFVHACVEHYLEEGQGVAGKALQSNRPFFYSDVKAYNISAYPLVHHARKYKLNAAVAVRLRSIHTNDDDYIIEFFLPVNMNGSEEQQLLLNNLSDTMQRMCQSLRTVSDAELYGIEGSQVQFSKEEGSHMAPDGDHDSVMPMSLTNNETEAAHNQAMDGSRKQIEKKKSPAEKNISLSVLQQYFSGSLKDAAKSLGVCPTTLKKICRQHGISRWPSRKINKVNRSLKKIQTVLDSVKGVEGGLKFDPYKGGFMSGGSSNQEINAHKSSLFRKKCSVKYPDPAAGSKDSKPIAMDDGGLRQEPFPVSILESSWCDIAYHSPNTLVADEMADKLGEHHNPTTSSMSDSSNGFGSILRGSRKFENRKHLKAKSPCVDNGSKLVVKAAYGEDRIRFKFDPAAGCLQLYEEVATRFKLQIGSFQLKYLDDDEEWVRMVNDSDLKECMEILDDHGTRAVKFLVLDIPSGLSSRGSNT 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00301 837 Gene3D - 742 827 - -
Adu10g00301 837 SMART PB1_new 744 826 IPR000270 GO:0005515
Adu10g00301 837 ProSiteProfiles PB1 domain profile. 744 826 IPR000270 GO:0005515
Adu10g00301 837 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 652 836 - -
Adu10g00301 837 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 273 652 - -
Adu10g00301 837 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 93 273 - -
Adu10g00301 837 PANTHER PROTEIN NLP8 652 836 IPR045012 GO:0003700
Adu10g00301 837 PANTHER PROTEIN NLP8 273 652 IPR045012 GO:0003700
Adu10g00301 837 PANTHER PROTEIN NLP8 93 273 IPR045012 GO:0003700
Adu10g00301 837 ProSiteProfiles RWP-RK domain profile. 520 608 IPR003035 -
Adu10g00301 837 SUPERFAMILY CAD & PB1 domains 740 825 - -
Adu10g00301 837 Pfam RWP-RK domain 540 588 IPR003035 -
Adu10g00301 837 Pfam PB1 domain 746 823 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00301 Adu-Chr10 3569325 3579422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00301 273 834 NLP Transcription Factor Family AT2G43500 48.714 8.38e-168 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu10g00301 PB1 5.8e-15 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00301 - - adu:107468617 1481.85