Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00294 ATGACCATTAAGAGTTGTGGCTGCTTTGGAGCCTCAACTACAAAGAAGAAGAAAACTATAACTTCTCATAGTCCCAATGAAATTGATGGCTATCCCTTAGCCAATGTTAGGCAATTCTCTGATAAGGAACTGAGATTGGCAACTGATAATTATCATTCAAACAGTAAGATAGGAAGAGGAGGCTTTGGAACTGTTTTCCAGGGAACCTTAAAAGATGGAAGACAGGTAGCAGTGAAGACCCTTTCAGTTGGATCAAAGCAAGGAGTTCATGAATTCTTGACTGAAATTAAGACATTATCAAATGTTAGACATCCAAACCTTGTTGAATTGATTGGATTCTGCATTCAAGGACCTAGCCGCACATTAGTCTATGAGTATGTGGAAAATGGCAACCTTGATAGTGCATTACTTGGCACAAGGACTAAGAGAATTAAACTAGATTGGAGAAAAAGATCTGCTATttgcataggtactgctaaaggtcttgcatttcttcatgaggaaattgtgccacatattgtacatagagacatcaaagctagtaatgtactactcgacaaagattataatccgaaaattggtgattttggattggcaaaGTTATTCCCAGATGACATTACTCACATCAGTACAAAAATTGCCGGAACAACGGGTTACTTAGCACCAGAATATGCATTAGGTGGACAGTTAACCATGAAAGCTGATATATACAGTTTTGGTGTTCTTGTGCTTGAAATCATTAGCGGCAAACGCAGCTCGAGGAGTAACTGGGGAGACTCCAACAAACTCCTATTGGAATGGGCATGGCAACTTCATGAAGAGGGTAGACATTTGGATATTGTGGATCCAGAGATGGAAGAGTTTCCAGAGGAAGAGGTGATGAAGTACATGAAGGTTGCATTGTTTTGCACACAGTCAGCAGCAAGCAGGAGGCCATTGATGACACAAGTGGTTGACATGCTGTCAAAGGAAATTCAGCTCAATGAGAGTCAATTACAACAACCAGGATTCTTCATGGATTCAAATGATGAATCCTCTCGGATCAAGTCAACTTCTGACTCTATAATTCCTAATGTTAGCTCTAGTCATAGTTTTACTCAGGTGGCCCCTCGATGA 1116 0.3566 MTIKSCGCFGASTTKKKKTITSHSPNEIDGYPLANVRQFSDKELRLATDNYHSNSKIGRGGFGTVFQGTLKDGRQVAVKTLSVGSKQGVHEFLTEIKTLSNVRHPNLVELIGFCIQGPSRTLVYEYVENGNLDSALLGTRTKRIKLDWRKRSAICIGTAKGLAFLHEEIVPHIVHRDIKASNVLLDKDYNPKIGDFGLAKLFPDDITHISTKIAGTTGYLAPEYALGGQLTMKADIYSFGVLVLEIISGKRSSRSNWGDSNKLLLEWAWQLHEEGRHLDIVDPEMEEFPEEEVMKYMKVALFCTQSAASRRPLMTQVVDMLSKEIQLNESQLQQPGFFMDSNDESSRIKSTSDSIIPNVSSSHSFTQVAPR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00294 371 Pfam Protein tyrosine and serine/threonine kinase 54 321 IPR001245 GO:0004672|GO:0006468
Adu10g00294 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 362 - -
Adu10g00294 371 ProSitePatterns Protein kinases ATP-binding region signature. 57 79 IPR017441 GO:0005524
Adu10g00294 371 MobiDBLite consensus disorder prediction 336 371 - -
Adu10g00294 371 ProSiteProfiles Protein kinase domain profile. 51 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00294 371 PIRSF ILK 9 334 - -
Adu10g00294 371 Gene3D Transferase(Phosphotransferase) domain 1 127 344 - -
Adu10g00294 371 SMART serkin_6 51 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00294 371 PANTHER - 2 362 - -
Adu10g00294 371 SUPERFAMILY Protein kinase-like (PK-like) 35 354 IPR011009 -
Adu10g00294 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Adu10g00294 371 Gene3D Phosphorylase Kinase; domain 1 22 126 - -
Adu10g00294 371 CDD STKc_IRAK 57 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00294 Adu-Chr10 3491916 3493826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00294 39 370 Receptor kinase-like Gene Family AT1G56120 48.795 1.57e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu10g00294 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00294 - - gmx:100788143 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03390 03 120983058 120987642 Adu10g00294 10 3491916 3493826 PCT