Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00287 ATGTACATAGGAACTTCCATGCGAAGGTCTTTCAAGGATTCCTTGAAAGTCCTTGAAGCTGATATTCAGCACGCCAATACCCTGGCATCAGAGTTTCCAAAGGAGTGTGATGGTGCATGCCTTCAGATGAGAATGTCATACAGTCCAGCTGCACACTTGTTTCTTTTCTTGGTGCAATGGGCAGATTGCAATCTTGCTGGAGCACTTGGCTTGTTAAGAATCCTAATTTACAAGGTATATGTGGATGGAACAACTACCATGTCTACTCATGAAAGGAAAGCTAGCATTAGAGAATTCTATGCGGTAATTTATCCGTCTTTGTTACAACTTCAGAAAGGGGTTACAGATTCAGAGGATAAGAAACAGAAGGCTGTTTGTATGGAGAGGTATCGAAAAAGAGACGATGAGGATCATCAACTACATTCTGATATAGACATTGAAAGAGAAGAAGAATGTGGAATATGCATGGAAGTGAATAGTAAGATTGTGCTGCCTAACTGCATCCATGCTATGTGCCTGAAATGTTACCGTGAATGGAGAACAAGATCCCAATCGTGTCCCTTTTGTCGCGATAGTCTGAAGAGAGTGAACTCGTGCGATCTCTGGGTATTTACCGATAGCCGGGATGTAGTTGACATGGAAACAGTGACAAGGGAGGATATCAAGAGGCTTTTCATGTACATAGATAAGTTGCCATTGATCATTCCAGACTCGCTTTTCGATCCCTACGACTCTCAACTAAGATAA 747 0.4203 MYIGTSMRRSFKDSLKVLEADIQHANTLASEFPKECDGACLQMRMSYSPAAHLFLFLVQWADCNLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDSEDKKQKAVCMERYRKRDDEDHQLHSDIDIEREEECGICMEVNSKIVLPNCIHAMCLKCYREWRTRSQSCPFCRDSLKRVNSCDLWVFTDSRDVVDMETVTREDIKRLFMYIDKLPLIIPDSLFDPYDSQLR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00287 248 ProSiteProfiles Zinc finger RING-type profile. 152 190 IPR001841 -
Adu10g00287 248 SUPERFAMILY RING/U-box 137 195 - -
Adu10g00287 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 200 IPR013083 -
Adu10g00287 248 Pfam Zinc finger, C3HC4 type (RING finger) 149 195 - -
Adu10g00287 248 SMART ring_2 152 189 IPR001841 -
Adu10g00287 248 ProSitePatterns Zinc finger RING-type signature. 167 176 IPR017907 -
Adu10g00287 248 PANTHER RING FINGER PROTEIN 41, 151 4 247 - -
Adu10g00287 248 PANTHER PEROXISOME BIOGENESIS FACTOR 10-LIKE 4 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00287 Adu-Chr10 3394533 3397406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00287 151 230 C3H Transcription Factor Family AT2G20030 33.333 7.02e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00287 K25840 - cpap:110817919 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03397 03 121120670 121124419 Adu10g00287 10 3394533 3397406 PCT