Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00251 ATGCAGTGGCAGGGTACTTCAGTAACACTTGTCCACTTTATGAGACCAACTCTAAAAAAGCTGGTGGCAGTGTGCAGAGAAGACTGTGGCAGCGTAAATGTTAAGCAGAGCGAGACTGAGTTTTCCTGGGTGGTGGCTCCACATGTGTTGGCGAAGATTGGTCGGCTTCACAAGAGAGTGCGCTGTGCTACGGAGTACCGAAGCTGGGCGAGACTGCCATCGATCGCGAACGGCTGGTGGAGGACCGTGTTCATAATTTCTGATCCCAACAAATTGGAGCCTAAAGTTTGCAATTGTAAAAACAGAAGTACTCTAATTTCACATATGGGAATTAGCCGCTTCGTGCCGACTAACAGTAGAGATGGATACCATAAAGGGGATGCGAGATGTGATCCAGGTAACCAAACAGATGACTCCGCTGAATTTGATGTAATGAATGAGGATTCAGATGAGGAAGCATCTGGTTACGGAGATGTATTGGGGCTGACGGCAGAGGATATTAACCGGATGGTGTTTCGGACTGAGCAACGAGCCTATGAATTTTACCTGCGATTAGGAAAATGCCATGGATTTGGCGTCCGGAAAGGGGATTATGGCAAGGATGAAAATGGAAATTTGATCCGTAGAAGATTCTTCTGCAACCGGGCCGGGTTGAGAGATGAGAAGCACTATGCAAGATTAGATAGGAAGAGAATACATAAACCAGAAACCCGCACAAATTGCGAGGCAAAGTTATCAATATATTTGGATCGAGATGCTGCGAAGGCACATATGGAAAGCATGCATAGCTATGGACTTCCTACCTCGAAGATAGTCGGATACATGTCTGGAATTGCAGGAGGTTACTCGCTGCTGGGGTTTACAAAGAAGGATGCGTATAACCACTTAGATAAAAAAAAAAAGCAGGGGAACATCGCCGATGGTGACACGAACGCCACTGTCGTGTATCTACAAGGAAAAGCAGTTACAGATCCAATGTCGACGGCGAGATATAACATCACTAACGAAGTGGTCGTCACAAATGGAGATGATGCAATTATTGCAGCGGTCCGAAAGGTCTTCCCAGATACAACGCACCGCCTTTGTGCATGGCATCTTCAGAAGAACATCACATCAAACGGGAACGAGCAGATGTTTAGAGATTTATTTTCCAAATGGCTGTATTCCGACATGGGCGTTGATGAATTTGAGAATGAGTGGGCCACTGCTACAGAGGAGTTCCGTTTCAACGAAAAGTGTTGGGCCCTACAGATGTACAAGAAAAAACACATGTGGGTCAGTACATATCTGAGGGAAAAGTTTTGTGCTGGATATCGAACGACATCAAGATGCGAGGGATTAAACTCTCACGTCAAGAAGTTCCTGACTTCCAGGCACACAATTTTGGAGCTTGTGCATAATTTGGAGGTGCTTGTACGTGAGTACCGAAACAATGAGATGGTGGCACAATTTAACTCCGTGAATAGCATCCTTGTGATGACAACATGTCTTGATCCAATTGAGAAGGGGACTGCTAGGATGTACACACGAGCAATTTTCTCTCTGGTGAAAAAGGAGATTGATGCTGTCGGAGTGGTGAATTATGTAGCGAAGAGGAGAATTTCAACCACAACGGTATACACGACCGAAGAATATGGTAATCTAGGTCGCACTTTCATCACTCAGTTTGATAGGAACATGGGGAAATTGCTCTGTCACTGCAGATTTTGGGAACGAGAAGGCTTCCCGTGCCGACACATGTTCTTTGTCATGAAGTACGAGCATGTTCAAGAAATACCACATCGTTTAGTTCTCACACGGTGGCGGAAAGACGCGAAATCTATCGATGCATATGTAGAGCGAGGTGAAGCAGACGATGAGAGGGGATTCTTAATGCGGCATGGCGTTCTTCACAAGGCATCCCAGTGGCTGTTGTCTCTTGGTGCTAGGAATCAAGTGGTGTACACAGAGGCCGTAAAAGGAATTCGGGCCTTGTGTACACGTCTGATTGAAGCATTCGGTAGAAATGATGCGACGGGACAACACAGGAAAGAAGGGTGCGTGAAGGACCTGGTGGTAGTTAGGACAAAGGGTGCACCACGACATAAAAGGCAGCGTGGTAAAAGGAGGAAGTGTACAATTTGCAAGAGACTTGGACACACAAAGAGGAGGTGCACGGGTAACACGAGGCAGACAGGGACAGAGCGGGTAGAGTCTGACGATGATTCAAGCGATGATGCACTCCATACTCAGAAATCTTCATCCAGTGCAAACGAAGATAAGAAGCATGATGCCTGCTTGAATGAAAGCATGAACGATCCGGAGACGATGAAAAGGCCCATGTCAACGGCTGAGCTGGGTGATGGAATGTATCACCCAGTTGGTCTTGGCGAAGACGTGATAGGAACAGCGCAAAGTGGGAATGTAAGGTCAGAACATCTACTGGACTCTACCGACTTCACTAGGGAGGTCATGGAACTGCTCCGCAACCTCAGCTAG 2478 0.4673 MQWQGTSVTLVHFMRPTLKKLVAVCREDCGSVNVKQSETEFSWVVAPHVLAKIGRLHKRVRCATEYRSWARLPSIANGWWRTVFIISDPNKLEPKVCNCKNRSTLISHMGISRFVPTNSRDGYHKGDARCDPGNQTDDSAEFDVMNEDSDEEASGYGDVLGLTAEDINRMVFRTEQRAYEFYLRLGKCHGFGVRKGDYGKDENGNLIRRRFFCNRAGLRDEKHYARLDRKRIHKPETRTNCEAKLSIYLDRDAAKAHMESMHSYGLPTSKIVGYMSGIAGGYSLLGFTKKDAYNHLDKKKKQGNIADGDTNATVVYLQGKAVTDPMSTARYNITNEVVVTNGDDAIIAAVRKVFPDTTHRLCAWHLQKNITSNGNEQMFRDLFSKWLYSDMGVDEFENEWATATEEFRFNEKCWALQMYKKKHMWVSTYLREKFCAGYRTTSRCEGLNSHVKKFLTSRHTILELVHNLEVLVREYRNNEMVAQFNSVNSILVMTTCLDPIEKGTARMYTRAIFSLVKKEIDAVGVVNYVAKRRISTTTVYTTEEYGNLGRTFITQFDRNMGKLLCHCRFWEREGFPCRHMFFVMKYEHVQEIPHRLVLTRWRKDAKSIDAYVERGEADDERGFLMRHGVLHKASQWLLSLGARNQVVYTEAVKGIRALCTRLIEAFGRNDATGQHRKEGCVKDLVVVRTKGAPRHKRQRGKRRKCTICKRLGHTKRRCTGNTRQTGTERVESDDDSSDDALHTQKSSSSANEDKKHDACLNESMNDPETMKRPMSTAELGDGMYHPVGLGEDVIGTAQSGNVRSEHLLDSTDFTREVMELLRNLS 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00251 825 Pfam MULE transposase domain 331 369 IPR018289 -
Adu10g00251 825 Pfam FAR1 DNA-binding domain 180 251 IPR004330 -
Adu10g00251 825 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 151 247 IPR031052 GO:0006355
Adu10g00251 825 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 336 670 IPR031052 GO:0006355
Adu10g00251 825 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 151 247 - -
Adu10g00251 825 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 336 670 - -
Adu10g00251 825 SUPERFAMILY Retrovirus zinc finger-like domains 691 724 IPR036875 GO:0003676|GO:0008270
Adu10g00251 825 MobiDBLite consensus disorder prediction 727 741 - -
Adu10g00251 825 MobiDBLite consensus disorder prediction 748 762 - -
Adu10g00251 825 MobiDBLite consensus disorder prediction 717 783 - -
Adu10g00251 825 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00251 Adu-Chr10 3078965 3086388 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g00251 FAR1 3.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00251 - - adu:107468207 1441.4