Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00247 ATGGCATCTTCTTCTTCTTCAGCTTCTCGTGAGGGACACTACAGAGGGGTTAGGAAGAGGCCATGGGGACGTTACGCTGCTGAGATACGCGATCCTTGGAAGAAGACACGTGTATGGCTTGGTACATTCGATACTCCTGAAGAAGCCGCCCTAGCTTACGACGGTGCCGCGCGTTCTCTCCGTGGTGCTAAAGCCAAGACTAATTTCCCCCCGGCTCCGGTCGCCGCCGCCGGAGGAATCTGTCTCGACCTCAACGTTAACGCTCCTAACTCTGATCATCATCGCTGGCCCTCCGTACCGGTTCGCGCCGGCGTTGGCGGTGGTGGAATCTTCGGCGAGTTTCTCCATACTCGCGTTCTCAAGGACGTTGATCTGGCTCATCAACCGCATCAGCCGCCTCCGCCGCATCCGATTCATCATGCGGCGGCGTTAGCAGCTCATCACCACAGACGCGGCGAGGTGACAGTAGCGGTTGCCGGAGGAGGAGTAGAGCAGGTGGCGGGGAGTGGTTCAACGGCGTCGTATCTAGGGCTTGTTCGGCGCGGGATCCCGATCGATCTGAACGAGCCTCCACCTTTGTGGCTTTGA 588 0.5867 MASSSSSASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPAPVAAAGGICLDLNVNAPNSDHHRWPSVPVRAGVGGGGIFGEFLHTRVLKDVDLAHQPHQPPPPHPIHHAAALAAHHHRRGEVTVAVAGGGVEQVAGSGSTASYLGLVRRGIPIDLNEPPPLWL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00247 195 CDD AP2 13 72 IPR001471 GO:0003700|GO:0006355
Adu10g00247 195 Pfam AP2 domain 13 62 IPR001471 GO:0003700|GO:0006355
Adu10g00247 195 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 8 129 - -
Adu10g00247 195 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Adu10g00247 195 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Adu10g00247 195 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Adu10g00247 195 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE 8 129 - -
Adu10g00247 195 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
Adu10g00247 195 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Adu10g00247 195 SUPERFAMILY DNA-binding domain 13 70 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00247 Adu-Chr10 3042604 3043965 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00247 4 195 AP2-EREBP Transcription Factor Family AT1G28360 45.192 3.97e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu10g00247 AP2 3.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00247 - - aip:107624305 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00247 10 3042604 3043965 Adu10g00247 10 3042604 3043965 ECH