Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00236 ATGGAGGGGGAAGCTGCTTCGGATGCAGAGATTGAGAACAATAATACTCAGAAGAGGGAAGATGTTGTTGGTGATAACAGCAATGAGAACAACAATGGAAGCAACAGTAAAATTGGTAACTCGAATGAGGGTCAGAGCAAGCCCAAGCGACAGATGAAGACCCCGTTTCAGCTTGAGACACTGGAGAAAGCTTATGCTTTGGAGACTTACCCTTCAGAGACAATGAGGGCTGAGCTCTCTCAGAAGTTGGGGCTGTCCGATCGGCAGCTACAGATGTGGTTCTGCCACCGCCGGCTGAAGGACAAGAAGGATTTGCCGCCTAAGAAGCAGAAGAAGGCAGTGCCGGCGCCAGTGCCGGCGCCAGTGCCAGTGCCGGCACCACCTGTGCCAGATTCTCCTCCAGACCTCAGGCTGGGCCCTGAGCATGTTAATGAGTATGGATCAGGGTCAGGTTCGGGCTCCAGCCCGCTTACCCGCCCTGAGTTTCGAAATGTAGTTCCCCGGGGTGGTATGCTGGGGTACTATGAGCCACCACAAGCTATGATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTGGGGCAGCCACTGAGGGAAGATGGACCCATACTCGGAGTAGAGTTTGATCCTTTGCCCCCAGGTGCTTTTGGGGCACCCATAGCTGTTACAGAACAGCAAAAGCGACCTAGTCTTGCTTATGACAGTAAAATGTATGAAAGACACGATGTTAGAACAAATAAGGCTATGGCGAGGACATTACCGGAATATCCATTTCTTCCAAACCAGCCTGGCATTAGGTCAGATGCCTTTGGACAATTAAATCCACCTCATTTACACGATCCAATGGATGGTCCTTCCAGAACTTCCTTTCCTATAAATGAACAGCTGCACAAAATTCATGCTACCCAAAGTCATTCTGCTCGTGTTCGCGTTTCATCTCAGCAAGACAAGCAAGTGATTCCTTATCCATCTCCTCCTCGAGAAGTTGATGTTGCCCAGCCAAGGGAATCATATGCAAACATAGCTAATGCTGGAATAGACTCACACTTCGCCGATCATCCGATTGCTGGTCAAGAAAATCCTTATGCTTTACCCAGTGGACAAGTTTTGCAGAACGATATGACAATCCGAATAGAAAAGAAACGAAAGATTGATGATGCCAAAATTGCAAAGGAGGTTGAAGCCTATGAAACGAGGATGAGGAAAGAGCTTGAGAAGCAAGATAACCTTAGACGAAAGAATGAAGAGCGACTAAGGAAAGAAATGGAGAGACAAGAACGTGAAAGAAAAAAGGAAGAAGAGAGACTGATACGCGAGAGACAGCGAGAAGAGGAAAGATCTAGGCGTGAACAAAGACGTGAAATAGAACGGAGGGAAAAGTTTTTGATGAAAGAACACTTGAGAGCTGAGAAAAGAAGACGAAAAGAAGAGCTTCGCAAAGAAAAAGAGGCCGAGAGAAGGAAGGCTGCCCTTGAAAAGGCAGCTGCCCGTAGAATAGCTAAGGAATCTATGGAGCTTATTGAGGATGAACAGCTGGAATTGATGGAGCTGGCTGCTACAAGCAAGGGACTTTCCTCGATTATACAACTTGATCTTGATACATTGCAAAACCTTGAATCATTTAGGGATTCATTGTGTTTTTTCCCACCTAAGAGTGTAAAACTGAAAAGGCCATTTGCTATCCAACCTTGGATTGACTCTGATCAGAATGTTTGGAGATTCCTGATTACTTTTGCTGATGTTCTTGAGTTATGGCCTTTCACTCTTGACGAGTTTGTACAAGCATTTCATGACTATGATTCAAGATTGTTGGGTGAGATACATGTAACTCTTCTTAAAGTTATAATAAAGGACATTGAAGATGTTGCAAGGACACCTTCAACAGGATTAGGAATAAGCCAGAATGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAAATTGTGGAAGGAGCATATGCATGGGGCTTTGACATCCGAAATTGGCAGAAGAACTTAAATCAGTTGACATGGCCAGAAGTTTTCCGACAGTTAGCATTGTCAGCAGGATTTGGACCAAAGCTGAAGAAAAGAAGTATTACATGGTCATATGCAAATGATAAAGATGAGAAAGGTCTATTAGCTCCTCGAAGGTCAAGGCACAGGTTAACTCCAGGAACAGTTAAATTTGCTGCCTTTCATGTTCTCTCACTTGAAGGTAGCAAGGGTCTAACAGTACTTGAGCTAGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACCACCAGCAAGACACCAGAAGCATCAATTTCTGTTGCTTTGACTAGAGACACTAAGCTTTTTGAAAGGATAGCTCCATCAACCTATCGAGTGCGTACTGCATTTAGAAAGGATCCTGCTGATGCTGAGTCCATCCTTTCCGCAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCAGCTGGTGAAGATGCTGACGATGTTGAAAGAGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGATGTTGATGATCTAGTAAACCCTTCAAGTGCTGATCCAATTTCTGGACATTTTGATGAACCAAATGTTTCCACACCAAATGGAAAAGAAAATTTGGATAATGATGTAAAACTTGATCAAAATGAGTTTGAAATAGATTTGCCTTGTTTTCCTGAGGATCGTTACAAGGAAGCTGATTGCCCTGGCTCTGTCACCGAACAACCTGTTGTTTGTGAAGATTTGAATACTGGAAATCCTGATCAAGATAATATGGAAATTGATGAAAGTCAATCTGGAGAATCCTGGGTGCAAGGACTTGCTGAAGGAGAGTATTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTAGTTGCATTGATTGGTGTGGCAAATGAAGGAAATTATATTCGTGTTGTTCTGGAGGATCGTCTGGAAGCAGCAAATGCTCTGAAGAAGCAGATGTGGGCTGAAGCACAGATAGATAAAGTTCGTCTGAAAGACGATACTATTAACAAACCAGATATTCCATTACTTATTGCCAACAAAGTTGAAACACATGACACATATCCTGCTGCTGTGGAGGGCAGTCAAAGTCCAATGCTGGACATCAATATTAATAGTATTAATATTGAAACATCACCTGGCACTGCAGAAAACCAAAAGCCAGCACCTGCTGCACAGAGCTTGCATGGTGAAAAGTCCTCCCAAATTCAAGATTTGTGCACAGGCACAGGTCCAGATCACCCTCAGGTGCAGGTACCTCCACAATATTCAAAAAGATCACGTTCACAGTTGAAATCTTATATTGCCCACATAGCAGAGGAGATGTGTATCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGTAATCGATATTGGCAGTTTGTTGCTTCTGCTTCTAGCAATGATCCTGGTTCTGGTAGGATCTTTGTTGAATATCATGATGGCAATTGGGAGCTTATTGATTCTGAAGAGGCCCTTGATATTCTTTTGGCAGCATTGGATTCAAGGGGGATCAGGGAATCTCATCTGCGCTTGATGCTGAAAAGGATTGAGAAGTCCTTTAAAGAAAATGTTCGAAGGAATACACAATGTGCCAGTGCCAAAATAGGAAGCAAAGATAAATTTTCGATCAAAAGTGAAGAAAATAATGAACCATATTCAATACCTGATCGCCATGATGGAGCTGACAGTCCTAGCAGTACTCTTCATAACTTGAACTCTGACAAATTGGAAACATCATCATCCTTCAAGGACTCCCACTGTAAATCCTGCCACAGGACTTTCGCTACAAATAATGGATTTAGTTCTACCAAGCATGCATTTCATTGTGGAGACAAGTTACCCAAAAATGTTCCTATGGAATCTTCTCTTCCCTTGCGGACAAGATTGCTTAAGGTTCTGTTTGCTTGTATTGAGGCATCAGTTCTCCCCGAAGCATTTGGAACAATTTGGACGAATGATGCTAGGAAGCATTGGGGTGTGAGGTTGAGCAAATCATCCTCTGTTGAGGAGCTTTTACAGATATTGGCCTTGTTTGAGAAAGCTCTACGGAGAGATTTTCTATCATCAAACTTCTCTACAACAGACGAACTATTGGGACTGAGCAATATGGGTGGTAATGCTTCACTTACTTCCACTGATCCTGAATTGGTAGCTGTACTTCCATGGGTTCCACAAACTACTGCAGCAGTGTCTCTCAGGCTTCTTGAGATTGATTCATCTATCAATTATGTACATCTTGAGATACCTGAGCCATGCAAAGAGAAAGAAGCGAAAGAGTACATCAAGCTTCCTTCAAGATATACGTCCTTCAAATGCAATAGAGAGGTTGAACCAGCAGAGTTAGGGCATGGTGAATTCATTAAAGATAAATCTGCTTCAAAGAAAATTGTTCGAAGTGGTAATAAACGTGGACGAGGGTCTAATGATCAAGGACGGGGTAAAAAGATGTCTAAAAGAATGTACAGTTCCAAACGAGATACTGGCCGCCGAAATGTAAAGGTCAATGAGAATCTAAGTGACAAGCTAAAACAGCAGGGACGAGTACTACAAGGATCAGCTGGTGGTCGTGGTCGCCGAACGGTAAGGAAACGGAGAGTGGAAAAGAGAGCTGTTGAAGATTTGTTGCTGGGCCATACCGCAGTGAGCCATAGCCCCAATATTGACAGAGAACCATTGAGAAGATTTGATGAGGAGTGGGATGGTGAAAGGGCAAGTCCCATGACTCCCGTCCACATTGAAATTGATGACAATAGCAACAGTGCTGAAGAGGTGGAATCTGATGACAACGGCCAAGCAGTAGAATATGATCAAGGTAACTGGGAGGTGGGTTATAATGGCATTCCCGCCAACAGTTGGGGTAGGGACTTTGCTGGAATGAGTGATGAAGATGCGGATGCTTTTGAAGATGACAATGACAACAACAATGACATCGGCATTGAAGAGAACGAAGAAGAGGATTCGGAAGCAGATGTTATGAGTGAGGGTTCAGATGGCATGGCAAATCGGGTCATAAATGAAGAAGGCTCAGACTCATCTGAATCTGAAGATTCTTATGATTAG 5058 0.4361 MEGEAASDAEIENNNTQKREDVVGDNSNENNNGSNSKIGNSNEGQSKPKRQMKTPFQLETLEKAYALETYPSETMRAELSQKLGLSDRQLQMWFCHRRLKDKKDLPPKKQKKAVPAPVPAPVPVPAPPVPDSPPDLRLGPEHVNEYGSGSGSGSSPLTRPEFRNVVPRGGMLGYYEPPQAMMELRAIACVEAQLGQPLREDGPILGVEFDPLPPGAFGAPIAVTEQQKRPSLAYDSKMYERHDVRTNKAMARTLPEYPFLPNQPGIRSDAFGQLNPPHLHDPMDGPSRTSFPINEQLHKIHATQSHSARVRVSSQQDKQVIPYPSPPREVDVAQPRESYANIANAGIDSHFADHPIAGQENPYALPSGQVLQNDMTIRIEKKRKIDDAKIAKEVEAYETRMRKELEKQDNLRRKNEERLRKEMERQERERKKEEERLIRERQREEERSRREQRREIERREKFLMKEHLRAEKRRRKEELRKEKEAERRKAALEKAAARRIAKESMELIEDEQLELMELAATSKGLSSIIQLDLDTLQNLESFRDSLCFFPPKSVKLKRPFAIQPWIDSDQNVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVTLLKVIIKDIEDVARTPSTGLGISQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEVFRQLALSAGFGPKLKKRSITWSYANDKDEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRTAFRKDPADAESILSAARKKIQIFENGFPAGEDADDVEREESESDEVDEDPDVDDLVNPSSADPISGHFDEPNVSTPNGKENLDNDVKLDQNEFEIDLPCFPEDRYKEADCPGSVTEQPVVCEDLNTGNPDQDNMEIDESQSGESWVQGLAEGEYSDLSVEERLNALVALIGVANEGNYIRVVLEDRLEAANALKKQMWAEAQIDKVRLKDDTINKPDIPLLIANKVETHDTYPAAVEGSQSPMLDININSINIETSPGTAENQKPAPAAQSLHGEKSSQIQDLCTGTGPDHPQVQVPPQYSKRSRSQLKSYIAHIAEEMCIYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEYHDGNWELIDSEEALDILLAALDSRGIRESHLRLMLKRIEKSFKENVRRNTQCASAKIGSKDKFSIKSEENNEPYSIPDRHDGADSPSSTLHNLNSDKLETSSSFKDSHCKSCHRTFATNNGFSSTKHAFHCGDKLPKNVPMESSLPLRTRLLKVLFACIEASVLPEAFGTIWTNDARKHWGVRLSKSSSVEELLQILALFEKALRRDFLSSNFSTTDELLGLSNMGGNASLTSTDPELVAVLPWVPQTTAAVSLRLLEIDSSINYVHLEIPEPCKEKEAKEYIKLPSRYTSFKCNREVEPAELGHGEFIKDKSASKKIVRSGNKRGRGSNDQGRGKKMSKRMYSSKRDTGRRNVKVNENLSDKLKQQGRVLQGSAGGRGRRTVRKRRVEKRAVEDLLLGHTAVSHSPNIDREPLRRFDEEWDGERASPMTPVHIEIDDNSNSAEEVESDDNGQAVEYDQGNWEVGYNGIPANSWGRDFAGMSDEDADAFEDDNDNNNDIGIEENEEEDSEADVMSEGSDGMANRVINEEGSDSSESEDSYD 1685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00236 1685 MobiDBLite consensus disorder prediction 1 57 - -
Adu10g00236 1685 MobiDBLite consensus disorder prediction 1041 1089 - -
Adu10g00236 1685 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1249 1685 IPR044977 GO:0006357
Adu10g00236 1685 MobiDBLite consensus disorder prediction 1471 1497 - -
Adu10g00236 1685 CDD homeodomain 49 98 IPR001356 GO:0003677
Adu10g00236 1685 MobiDBLite consensus disorder prediction 811 871 - -
Adu10g00236 1685 Pfam HB1, ASXL, restriction endonuclease HTH domain 719 787 IPR007759 GO:0006355
Adu10g00236 1685 PANTHER HOMEOBOX DOMAIN PROTEIN 703 1249 - -
Adu10g00236 1685 PANTHER HOMEOBOX DOMAIN PROTEIN 17 703 - -
Adu10g00236 1685 MobiDBLite consensus disorder prediction 820 842 - -
Adu10g00236 1685 MobiDBLite consensus disorder prediction 1458 1497 - -
Adu10g00236 1685 ProSiteProfiles HARE-type HTH domain profile. 719 788 IPR007759 GO:0006355
Adu10g00236 1685 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
Adu10g00236 1685 MobiDBLite consensus disorder prediction 1628 1658 - -
Adu10g00236 1685 MobiDBLite consensus disorder prediction 112 135 - -
Adu10g00236 1685 MobiDBLite consensus disorder prediction 1211 1232 - -
Adu10g00236 1685 Coils Coil 465 496 - -
Adu10g00236 1685 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 703 1249 IPR044977 GO:0006357
Adu10g00236 1685 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 17 703 IPR044977 GO:0006357
Adu10g00236 1685 MobiDBLite consensus disorder prediction 1623 1685 - -
Adu10g00236 1685 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 927 967 IPR028942 -
Adu10g00236 1685 MobiDBLite consensus disorder prediction 26 53 - -
Adu10g00236 1685 ProSiteProfiles DDT domain profile. 563 622 IPR018501 -
Adu10g00236 1685 Pfam Homeodomain 47 103 IPR001356 GO:0003677
Adu10g00236 1685 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1110 1182 IPR028941 -
Adu10g00236 1685 SUPERFAMILY Homeodomain-like 33 103 IPR009057 -
Adu10g00236 1685 Coils Coil 394 459 - -
Adu10g00236 1685 MobiDBLite consensus disorder prediction 420 453 - -
Adu10g00236 1685 Gene3D - 30 105 - -
Adu10g00236 1685 SMART testlast3 572 622 IPR018501 -
Adu10g00236 1685 Pfam DDT domain 572 619 IPR018501 -
Adu10g00236 1685 MobiDBLite consensus disorder prediction 101 161 - -
Adu10g00236 1685 PANTHER HOMEOBOX DOMAIN PROTEIN 1249 1685 - -
Adu10g00236 1685 SMART HOX_1 46 108 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00236 Adu-Chr10 2922220 2930479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00236 4 1611 Homeobox Transcription Factor Family AT1G28420 46.521 0.0 1194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Adu10g00236 WSD 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00236 - - gmx:100777465 2148.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00236 10 2922220 2930479 Adu10g00236 10 2922220 2930479 ECH
Adu03g03447 03 121762664 121771851 Adu10g00236 10 2922220 2930479 PCT