Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00231 ATGCGTCCAATCTCAGTGTTGCTGGTTCTGGCGGTTCTATCAGCGGCAGCAGAGTCACTGAACCAAGAAGGACTGTTCCTGTATGAAATGAAGCTCGCCATGGAAGACCCTCATTCCACGCTCTCCAACTGGAACACCAGAGACTCCACTCCCTGCAACTGGTTCGGTGTCACCTGCCACTCCCACACCGTCGTCACCCTCGACCTCTCCTCCGCCAACCTCTTTGGCCCATTCCCCTCTCACTCCCTTTGCCGCCTCCGCAATCTCACCACCCTCACCCTCTTCAACAACTCCATCAACGACACTCTCCCTTCCGACATCTCCCTCTGCCGCTCCCTCCTCCACCTCGACCTCTCCCAGAACCTCCTCACCGGACCCCTCCCCCATTCTCTCTCCTTGCTCCCCAACCTCCGCCACCTCGACCTCGCCGGAAACAACTTCTCCGGCCCCATCCCTCCCTCCTTCGGAGCCTTCCAGAAACTCCAGGTCATCAGCCTCGTCTACAATCTTCTAGAAGGAACCATACCACCTTCCCTCGGCAACATCACCACCCTCAAGATGCTCAACCTCTCTTACAACCCATTTTCACCGGCTCCGATTCCGCCGGAGCTCGGTAACCTCACGAACCTTGAGGTTCTGTGGCTCACTCAGTGCAACCTCGTCGGTGAAATACCCGAATCACTCGGTAACCTCAAGAGCCTCGTCGACTTGGACCTTGCATTCAATAACCTCCACGGTTCCATTCCCGCTTCGCTCACCGGGTTGACTCGCCTGGTTCAGCTCGAGTTGTATAACAACTCGTTGTCCGGCGAGTTACCCAAGGGAATGTCGAACCTTACCTCCTTGAGGCTCGTTGATCTGTCCATGAACCACTTGGAAGGTGAACTTCCCGACGAGTTCTGCCGTTTGCCGCTTGAAAGTCTCAACCTTTACGAGAATCGCTTCCAAGGGAACTTGCCGGCGACCATTGCAAACTCGCCGAACCTCTATGAGTTGAGGTTGTTCGACAACAGGTTCACTGGGAAGTTGCCGGAGAATCTGGGGAAGAATGCGCCGTTGAAATGGATTGATCTCTCGACCAACCAGTTCTCCGGTCCCATTCCGGGGACTCTATGCGATCACGGCCAGTTGGAGGAGCTTCTGTTGATATATAACTCGTTTTCCGGCGAGGTTCCGGCGAGTCTTGGCGCATGCACGAGCTTAACGCGTGTAAGGCTTGGTTTCAACCGGTTTTCCGGCGAGATTCCGGCGGGTTTGTGGGGTCTTCCTCATGTGTCTCTGCTTGAGCTTGTCGACAACTCATTTTCTGGTTCAATCGCGAGTACCATTGCCGGAGCGAGGAATCTTTCGCTGTTGAGGCTTTCGAAGAACGGTTTCGAGGGTCCAATCCCTCAAGAGATTGGATGGTTGGAAGCTCTTCAGGAATTTTCTGGTGGCGATAACAAGTTCAATGGCTCGTTGCCTCAGAGTTTTGTGAATCTTGGTCAGCTTGGTACTCTTGATCTGCATAACAATAAGCTCAGTGGAGAGCTTCCCAATGAGATTAAATCATGGAAGAAACTGAACGAGTTGAATTTGGCTAACAATGAGATTGGTGGTGAAATCCCTAAGGAAATTGGTAGTTTGTCAGTGCTTAATTTTCTTGATCTTTCTAATAACAAGTTTTCTGGGAAAGTACCCCTTGGTTTGCAGAATTTGAGGCTGAATGAGCTCAATTTGTCTCATAATCAGTTGAATGGAGAACTTCCCCCAATGTTGGCTAAGGATATGTACAAGGCTAGCTTTCTTGGTAACCCTGGTTTGTGTGGGGATTTGAAGGGTTTATGTAATGGAAGAGACAAGGATAAGAGTAGAAGCTTTGTTTGGTTGCTTAGAATCATGTTCATTGTTGCCACTTTGGTGTTTGTTGTTGGTGTGGTATGGTTCTACTTCAAGTACAAGGGTTTCAAGAATGCAAGGGCTATTGATAAGTCAAAGTGGACATTGATGTCATTTCACAAACTGGGTTTTGGTGAGGATGAGATCTTGAACTGCCTTGATGAAGATAATGTGATAGGAAGCGGATCTTCTGGGAAAGTCTACAAGGTTGTGCTTAGCAACGGTGAAGCTGTCGCCGTGAAGAAGATATGGGAAGGGGTTAAGAAGGAAATAGAATGTGGTGGAGATGTCGAAAATGGCCGCTTTCAAGACAATGCTTTTGATGCAGAGGTTGAGACATTGGGTAAAATTAGGCACAAGAACATTGTGAAGCTCTGGTGCTGCTGCACCACAAGGGATTGCAAGCTGTTAGTTTATGAGTACATGCCGAATGGAAGCCTTGGTGATTTGCTGCATAGCAGCAAAGGAGGGTTGTTGGATTGGCCAACCAGGTACAAGATAGCGGTTGATGCCGCAGAAGGCCTCTCTTATCTGCACCATGATTGTGTTCCTCCAATTGTACATAGAGACGTGAAATCTAACAATATCTTGCTGGATGGAGAGTTTGGTGCAAGGGTGGCAGATTTCGGAGTAGCTAAGGTTGTCGAAACCACCGGAAAAGGAACAAAATCCATGTCTGTCATAGCAGGGTCTTGTGGATATATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGTGACATATATAGCTTTGGTGTTGTGATACTAGAGTTGGTTAGTGGAAAGAGGCCGGTAGACCCTGAATTTGGGGAAAAGGACTTGGTTTCATGGGTTTGCACAACCTTGGATCAAAAAGGTGTGGAGCATGTGGTTGACTCAAGGCTAGATTCTTCTTTCAAACAAGATATATGTAAGGTGCTCAACATTGGCCTTGTGTGCACAAGCCCCCTCCCAATAAACCGGCCTGCAATGAGAAGAGTAGTGAAGATGTTGCAAGAGCTTGGCACCACCACCCCTCCTAACCCCAGATATCAACAGAACAAAGTCAACCAAGAATGA 2946 0.4895 MRPISVLLVLAVLSAAAESLNQEGLFLYEMKLAMEDPHSTLSNWNTRDSTPCNWFGVTCHSHTVVTLDLSSANLFGPFPSHSLCRLRNLTTLTLFNNSINDTLPSDISLCRSLLHLDLSQNLLTGPLPHSLSLLPNLRHLDLAGNNFSGPIPPSFGAFQKLQVISLVYNLLEGTIPPSLGNITTLKMLNLSYNPFSPAPIPPELGNLTNLEVLWLTQCNLVGEIPESLGNLKSLVDLDLAFNNLHGSIPASLTGLTRLVQLELYNNSLSGELPKGMSNLTSLRLVDLSMNHLEGELPDEFCRLPLESLNLYENRFQGNLPATIANSPNLYELRLFDNRFTGKLPENLGKNAPLKWIDLSTNQFSGPIPGTLCDHGQLEELLLIYNSFSGEVPASLGACTSLTRVRLGFNRFSGEIPAGLWGLPHVSLLELVDNSFSGSIASTIAGARNLSLLRLSKNGFEGPIPQEIGWLEALQEFSGGDNKFNGSLPQSFVNLGQLGTLDLHNNKLSGELPNEIKSWKKLNELNLANNEIGGEIPKEIGSLSVLNFLDLSNNKFSGKVPLGLQNLRLNELNLSHNQLNGELPPMLAKDMYKASFLGNPGLCGDLKGLCNGRDKDKSRSFVWLLRIMFIVATLVFVVGVVWFYFKYKGFKNARAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKIWEGVKKEIECGGDVENGRFQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGARVADFGVAKVVETTGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGKRPVDPEFGEKDLVSWVCTTLDQKGVEHVVDSRLDSSFKQDICKVLNIGLVCTSPLPINRPAMRRVVKMLQELGTTTPPNPRYQQNKVNQE 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00231 981 Pfam Protein kinase domain 681 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00231 981 Gene3D Ribonuclease Inhibitor 135 225 IPR032675 -
Adu10g00231 981 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Adu10g00231 981 Pfam Leucine Rich Repeat 209 231 IPR001611 GO:0005515
Adu10g00231 981 Gene3D Ribonuclease Inhibitor 226 304 IPR032675 -
Adu10g00231 981 SUPERFAMILY RNI-like 272 584 - -
Adu10g00231 981 ProSiteProfiles Protein kinase domain profile. 679 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00231 981 Pfam Leucine rich repeat 87 147 IPR001611 GO:0005515
Adu10g00231 981 Gene3D Transferase(Phosphotransferase) domain 1 768 979 - -
Adu10g00231 981 PANTHER LRR RECEPTOR-LIKE KINASE 4 971 - -
Adu10g00231 981 SMART serkin_6 679 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00231 981 Gene3D Ribonuclease Inhibitor 25 134 IPR032675 -
Adu10g00231 981 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 971 - -
Adu10g00231 981 Gene3D Phosphorylase Kinase; domain 1 663 767 - -
Adu10g00231 981 SUPERFAMILY Protein kinase-like (PK-like) 675 961 IPR011009 -
Adu10g00231 981 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Adu10g00231 981 SUPERFAMILY RNI-like 64 372 - -
Adu10g00231 981 SMART LRR_typ_2 207 231 IPR003591 -
Adu10g00231 981 SMART LRR_typ_2 86 110 IPR003591 -
Adu10g00231 981 SMART LRR_typ_2 134 160 IPR003591 -
Adu10g00231 981 SMART LRR_typ_2 279 303 IPR003591 -
Adu10g00231 981 SMART LRR_typ_2 255 278 IPR003591 -
Adu10g00231 981 SMART LRR_typ_2 494 517 IPR003591 -
Adu10g00231 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Adu10g00231 981 Gene3D Ribonuclease Inhibitor 305 611 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00231 Adu-Chr10 2875147 2878781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00231 19 964 Receptor kinase-like Gene Family AT1G28440 69.853 0.0 1375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu10g00231 Pkinase 7.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00231 - - gmx:100819887 1504.58