Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00214 ATGGCTTCTTCTAACAGACACTGGCCAAGCATGTTTAAGTCCAAGCCCACATGGCACCATGATATCACTATCACCGCCACTGCCTCCTCTTCTTCTTCTTCTTCTAGTAGTAGTAGTAGTAGAACCTCTCCTTACTCTTGCGACGACAGAAGCCCTGAGCCCAAGCCCAGGTGGAACCCAAAGCCCGAGCAGATTCGGATCCTGGAGTCCATATTCAACTCTGGGATGGTGAACCCTCCCAGGGATGAGATCAGGAAGATAAGGGCTCAGTTGCAAGAGTACGGTCAAGTTGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGCAAGTCTAGAACCAAACACAAGCTCCGCCACCTCCACACCAAGAACAACCCTCCTCCTCCTCCTCCTCCTCCGTCATCCACCTCATCCTCCTCCTCCGACAAGTCATCATCCCCACCCACCACCACTACTACTACTACCAATACCAATACCTATTTCAATACCCACAATCACACCGCCACTATTCCACCACCGCCGCCGCCGCCGCCGCCGCCGCACGTGGCTGCTGAGACTTTCATCTTCCCGCTGCAACATCATCAAGGTATAACATCATCCCCGCAAGGGCTTTTCTTCTCTGAGCTCTCCAATGTGGTGCAAGCTCATCATTATCAGCCGTCTCCACCACCACCTCATCAGCTGATGATGCATAACGTCGTTGGTCCCTGCACTAGTCTCTTGCTTAGTGAGATCATGATGAATAATAATGCTTCAAAGAAAGAACAACAAGAACATGCCAGCAACAACAATAAGTCCCTCAAATTAATGCACCACACACCAAAGCTTAGTTTCTGCGTCACTCCACCTACTACTACAACCGCCACCACCGCCACCGTCAACGCTCTCCTCACTCAAGGTAACATGAATACTATTCAAACTTATGCAGTAGGTAGTGGAGATGGAAGTGAGAAAATAACGGTGTTCATAAATGATGTGGCGTTTGAGGTGGCGGCGGGGCCATTCAATGTAAGGGAGGCATTTGGGGAGGATGCAGTCCTCATTCATGCCATAACTGGTCAACCTCTTCTCACTAACCAATGGGGTCTTACCCTCCACTCTCTCCACCATGGCGCTTCTTATTATCTGCTTCTACATACCCTCCCTCACGCACCTTATTAG 1161 0.5013 MASSNRHWPSMFKSKPTWHHDITITATASSSSSSSSSSSSRTSPYSCDDRSPEPKPRWNPKPEQIRILESIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRTKHKLRHLHTKNNPPPPPPPPSSTSSSSSDKSSSPPTTTTTTTNTNTYFNTHNHTATIPPPPPPPPPPHVAAETFIFPLQHHQGITSSPQGLFFSELSNVVQAHHYQPSPPPPHQLMMHNVVGPCTSLLLSEIMMNNNASKKEQQEHASNNNKSLKLMHHTPKLSFCVTPPTTTTATTATVNALLTQGNMNTIQTYAVGSGDGSEKITVFINDVAFEVAAGPFNVREAFGEDAVLIHAITGQPLLTNQWGLTLHSLHHGASYYLLLHTLPHAPY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00214 386 SMART HOX_1 53 120 IPR001356 GO:0003677
Adu10g00214 386 MobiDBLite consensus disorder prediction 23 63 - -
Adu10g00214 386 Gene3D - 25 115 - -
Adu10g00214 386 MobiDBLite consensus disorder prediction 168 184 - -
Adu10g00214 386 MobiDBLite consensus disorder prediction 113 184 - -
Adu10g00214 386 SUPERFAMILY Homeodomain-like 51 119 IPR009057 -
Adu10g00214 386 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 378 IPR044557 GO:0003700|GO:0050793
Adu10g00214 386 CDD homeodomain 54 116 IPR001356 GO:0003677
Adu10g00214 386 MobiDBLite consensus disorder prediction 48 62 - -
Adu10g00214 386 MobiDBLite consensus disorder prediction 23 47 - -
Adu10g00214 386 MobiDBLite consensus disorder prediction 137 167 - -
Adu10g00214 386 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Adu10g00214 386 Pfam Homeodomain 55 115 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00214 Adu-Chr10 2727387 2728595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00214 1 381 Wox Gene Family AT2G33880 43.675 1.54e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu10g00214 Homeodomain 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00214 - - aip:107619964 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00214 10 2727387 2728595 Adu10g00214 10 2727387 2728595 ECH