Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00207 ATGCTAGCCCTGCTATCTGAGGCCCTCCAAGATGCAAATTCAATGATTGAATACAATTTTATTCTTCCACCAATTTCTTCTTTGCATGATCCAAGAGGGCTAGTGCAAAAGGAGCTACTTAAGTTAATGAATACTCAACAATCGCGAGTGTTTATCGTGCTGCAATCATCACTAGAAATGGTGATTCACTTGTTCAGAGAAGCTTCAAATATAGGACTTGTAGATAAAGAATCAGTTTGGATAATCCCAGAGAGCATAGCCAATCTAATTGACTCCATCAACAAGTCTTCCATTTCATACATGGAAGGAGCTATAGGAATCAAGAACTACTACTCTGAAGGAAACAACAAGTACCAAGATTTTGAGGCTCAGTTTCAGAGAACTTTCTGGCCAAGAAGCCCCGAAGAAGATAACCGAAAGCCTGGATTTTTTGCTTTGCAAGCATATGATAGCATTAACATTGTGACTCAAGCACTGGACAGAATGAGCAATGGCAAAAGCAGCACAAATACCTTACTAAGAGAAATACAGTCAAGCAATTTTTCTGGTTTAAGTGGCCATATTGAATTTGAAGATGGAAAACTGCTGCAGAATCCTATCTTGAGAGTAGTGAATGTGGTTGGGAAGAGTTACAAAGAGTTGTGCTTTTGGACTCAGCAACATGGATTCTCCACAAGCTTCCATGCAACAAGACAAGATGGTGGTAATGGTAACCATGTTTCAGAATGCTTCAATGCTGTACTTTGGCCTGGGAATTTGCAAAGGACACCAAAGGGATGGAAAATGCCTACTAAACAAAAACCTATGAAAATCGCGGTCCCAGGCAGAACTACATTTTCCAGGTTTGTCAAGGTTGATTATGCCAAGAATCAAAACCTTGATAACTATGATGGATTCTGCATCAAGATTTTTGAGCAGGTGCACAAAATTTTGGGGTATGATCTACCCTATAAGTTCCATGCTATCAATTGCACCTATCCTGATTTGGTTCAATTAGTCTATAACAAGAGTTATGATGCTGTTGTTGGGGATATTACCATACTAGAGGAAAGATTGCCATATGTGGACTTCACTGTGCCATATGCAGAATCAGGATTGTCAATGTTAGTTCCAGCAAAGTCTGAAGAATCAGCATGGATGTTCACCAAGCCATTTACCTGGCAACTTTGGACAGTTACAGGAGCCATCTTGATCTATACAATGTTAGTAGTTTGGCTACTTGAGAAAGAACCTAATCCAGAGTTTCATGGCAATTGGAAGAGCCAGATCAGCACTGCTCTTTGGTTTACCGTCTCCTCTTTGTTCTTTGCTCACAGGGAGAAAATGTATAGAAAGTTAACTCGGGTGGTGATGGTATCATGGCTATTCCTAGTTCTGATTCTTAATTCAAGCTACACTGCAAGTCTTTCTTCAATGCTCACAGTGAAGCAGCTGCAGCCAAATGTCACAGACATTGAGTGGCTGAAGAAGAACAACATGAAGATTGGTTGTGATGGTGACTCATTTGTTAGAAACTACCTAGAGGATGTGGAGAAGTTCAAGCCAGAAAACATAATCAACATTACCAGTGAAGACAGATATATTGATGCATTTGCAAATGGTAGCATAGTAGCTGCATTTCTTGAATTACCCTATGAAAAAGTATTCATTAGTGAATATTGTGATGGATACATTGCCTCCATTCCCAGAACTAGATTTGGAGGATTAGGCTTTATGTTCCAGAAAGGCTCCCAGGTGACAAGAGATGTTTCCAGAGCTATATTACATCTCTCAGAAAATGGAGAGCTGAAGAAGTTGGAAGAGGAATGGTTGTTGAGTGCATCACAGAAATGCTCCAACAACATGACCTCCCAAAATTCCAATGGCATGGAAAGCTTGAGTCTAAGAAGCTTGTGGATTCTATTCGTCATCTCCGGTGCCACTTCCACTATTTGTATGCTACTATCAGTATGCCATGGCAAAAGTTGTGTCTCCAAAGTCAAGAATTGGCACCAGAACATAATGGCACAACAAGTGATGAGAGTATTTGGAGAAGGGGACAATCATTTGAGAGATGATGATAGCACTGAGCAACAACATCATCATCAACTTGTAAATGGAATCTTGATGCAACTTTTTCCACCACCACCAGATGAAGAAGCAAAAATTTCAGATCTTCCTCATCACTGA 2169 0.4016 MLALLSEALQDANSMIEYNFILPPISSLHDPRGLVQKELLKLMNTQQSRVFIVLQSSLEMVIHLFREASNIGLVDKESVWIIPESIANLIDSINKSSISYMEGAIGIKNYYSEGNNKYQDFEAQFQRTFWPRSPEEDNRKPGFFALQAYDSINIVTQALDRMSNGKSSTNTLLREIQSSNFSGLSGHIEFEDGKLLQNPILRVVNVVGKSYKELCFWTQQHGFSTSFHATRQDGGNGNHVSECFNAVLWPGNLQRTPKGWKMPTKQKPMKIAVPGRTTFSRFVKVDYAKNQNLDNYDGFCIKIFEQVHKILGYDLPYKFHAINCTYPDLVQLVYNKSYDAVVGDITILEERLPYVDFTVPYAESGLSMLVPAKSEESAWMFTKPFTWQLWTVTGAILIYTMLVVWLLEKEPNPEFHGNWKSQISTALWFTVSSLFFAHREKMYRKLTRVVMVSWLFLVLILNSSYTASLSSMLTVKQLQPNVTDIEWLKKNNMKIGCDGDSFVRNYLEDVEKFKPENIINITSEDRYIDAFANGSIVAAFLELPYEKVFISEYCDGYIASIPRTRFGGLGFMFQKGSQVTRDVSRAILHLSENGELKKLEEEWLLSASQKCSNNMTSQNSNGMESLSLRSLWILFVISGATSTICMLLSVCHGKSCVSKVKNWHQNIMAQQVMRVFGEGDNHLRDDDSTEQQHHHQLVNGILMQLFPPPPDEEAKISDLPHH 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00207 722 Gene3D - 154 272 - -
Adu10g00207 722 Pfam Receptor family ligand binding region 34 206 IPR001828 -
Adu10g00207 722 PANTHER GLUTAMATE RECEPTOR 3.4 1 652 - -
Adu10g00207 722 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 652 - -
Adu10g00207 722 Gene3D - 1 140 - -
Adu10g00207 722 SMART GluR_14 270 606 IPR001320 GO:0015276|GO:0016020
Adu10g00207 722 Gene3D - 548 612 - -
Adu10g00207 722 SUPERFAMILY Periplasmic binding protein-like I 5 260 IPR028082 -
Adu10g00207 722 CDD GluR_Plant 267 604 - -
Adu10g00207 722 SUPERFAMILY Periplasmic binding protein-like II 244 605 - -
Adu10g00207 722 Pfam Ligand-gated ion channel 605 640 IPR001320 GO:0015276|GO:0016020
Adu10g00207 722 Gene3D - 276 377 - -
Adu10g00207 722 SMART AABind_6 282 607 IPR001638 -
Adu10g00207 722 Pfam Bacterial extracellular solute-binding proteins, family 3 294 604 IPR001638 -
Adu10g00207 722 Gene3D - 378 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00207 Adu-Chr10 2681929 2684572 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00207 1 652 Ion Channels AT2G29120 33.579 8.31e-115 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00207 - - gmx:100818619 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00207 10 2681929 2684572 Adu10g00207 10 2681929 2684572 ECH