Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00205 ATGAATTCACATATTTTGCTTCTTCTTCCTATAATAATCACCTTGATCCTGTTCATCTCTGTTTCAGAAGCTCAAGCTGCCAAAACTCCTCAAAATGCAAGTGTTGGTGTTGTCATTGATGTCAATTCTGATACCGGAAAACAGCAGAGAAGAGCCATGGAGATTGCAGCTCAAACTGAGGAACTAATTGCTAAGAAGAAAGTTGAAGTCATTATTGGCATGGAGACATGGCAGGAAGCAGCTCTAGTTGCTGATCTTGGAGCTAAAGCTCAAGTACCAGTTATTTCATTCTCTGCTCCACCTATAGTACCTCCATTAATGCAAACTCGTTGGCCTTTCTTGATTCAAATGGATGATAATTACACTGCACATATGAACTGCATAGCAGATATTATCCATTCATACAACTGGCAAAAGGTTGTAGCAATATATGAAGATGACTTTTATAGCAGCTATTCCGGTATGTTAAGTTTCTTATCTGAGGCTCTACAAAAGGTTGATTCTGAGATTGAGTACCAACTAGTTCTTCCACCATTTAGTTCTTTAACTGATCCAAAAGGGGTTGTTCTTGATGAGTTGCTTAAGCTATTGCAAGTAAAATCTCGGGTTTTCGTTGTTCTTCAAGCATCATTACCTATGGTAACACATTTGTTCAGAGAAGCAAGGAAAATTGGATTGATGGGAAAAGATTCAGCTTGGATAATCAATGAAGGGAGTACTAGTACATTTGAATCTTACAACACAACCATTTTATCCTCTATGGAGGGTGCTTTGGGAATCAAAACCTACTATTCTACAAGCTCTATTGCTTATACTCAGTTTCAAGAGAATTTCCAAGCTGGAACATCTAAACCAGGATTATATGCACTAAAAGCCTATGATAGCATCACAATGATCGCAAAAGCCTTGGAGAAAATGAATGCTAACTCTAGCAACTCAAGAGTGTTCATGGAGAAAATGTTGTCAAGCAATTTTGATGGCTTAAGTGGGAGCATAAGTTTCAAAGAAAGCCAGTTATCCTACATTCCAAGAATGAGAGTAATAAATGTGGTTAATAACAGATACACAGAACTGGACTTTTGGACCCCAGAATTGAAGTTTGAAAGATCTCTTAAAACACTGGAAGACATAGAGAAAAGAGATGATCTTGGTACAAGAAACATAACTGGCACAGTGGTTTGGCCTGGAGGCCTAAATTCTACTGTTCATATTCCTATGGGATGGAAGTTACCAACAGAGATAAACCCTTTAAAAGTTGCAGTTCCTGTAAACCCAGCTTTTGAGAACTTTGTAAAGGAAGTATCACAAAATCAATATCAAGGTTTCTGTATTGATCTTTTCTACTCAATAAGACAAATTCTGAGTGAGAACTATGGTGACCTATTGCCCTATGAATTTCATTCCTTCAATGAATCCTATGACAGTCTTTTTCAGAATGTCATAAATGAGTCCTATGATGCTATAGTGGGAGATGTAACAATCCTTGCGAATCGATCAAAGTATGTTTCGTTCACTCAACCATACACTGAGTCAGGTTTATCACTCATTCTTCCAGTAGAGACTGAAGGATCAGCATGGTTGTTTATGAAACCATTTAGCTGGCAAATGTGGATAGCAACTAGTAGCATCCTCATCTACACAATGTTTATCATCTGGTTCTTAGAACATAAACTGAATCCAGAATTTGGTGGACCACTGAAAAATCAGATCAGCACCACACTGTGGTTTGCTTTTTCTTCTCTATTTTTTTCTCACAGAGAGAAAATAAACAGCAACTCTGCAAGAGTAGTAGTTGGTGTATGGCTATTTCTTGTGTTTGTTCTAACATCAAGCTACACTGCAAGCCTTTCTTCAATGCTCACTGTTACAAAGTTGAAATCTGGAAGAGATATTAATTGGCTGAGGCAAAATAATTTACCAGTTGGATGTGACAATGTCAGTACCTTTGTCAAGGACTACATGGTGAATGTATATAAATTACATCCAAAGCAAATCATAGATGTAGATGGTGAGAATGACATTGTGGAAAAATTCAAGACCAAACAAATTGTTGCTCTATTTCTTGAGAGTCCATATGAGAAGGTTTTCTTGAATAAGTATTGCAATCAATATTCTTCAACCACAGCTGCATATAGATTTGGAGGAATGGGATTTGTATTCCAAAAAGGATCTCCAATGGCAAAGGACTTCTCTGAAGCAATTTTAACACTAGCAGAAGATGGAACACTAAAGAAATTGGAAAATGAATGGTTGACACCTTCCAATGAATGCTCAAACACATCATCCCCTGAAACAGAGAGCCTGATCCTCAGCAATTTCTTGGGCCTCTATGCCATATGTGCTGCTACATCCACCATTTGCTTAGTGCTGGCATTGCTGACAAAATGGCACCATCATCATCATCATAATCAAGAAGAAGAAGCAGCAAGTCAACAAGAAAGGAAAGATGAGGATAGTGTTTTGAAGAGGGCATTTAGATTGAGCACAGAACTATATAATGGGAGCCTCAAAACACTAGATAGAGCTGCAACTACACAAGGGGTGCGCCTTAGGAATAATTCATCAAGGTGGGAGAGTGTAAGCACTTCTGAGTATGTAGCAAATAATCCACAACGCTCCCACTCAGCTGTCATAAGAATGCTATAA 2646 0.3806 MNSHILLLLPIIITLILFISVSEAQAAKTPQNASVGVVIDVNSDTGKQQRRAMEIAAQTEELIAKKKVEVIIGMETWQEAALVADLGAKAQVPVISFSAPPIVPPLMQTRWPFLIQMDDNYTAHMNCIADIIHSYNWQKVVAIYEDDFYSSYSGMLSFLSEALQKVDSEIEYQLVLPPFSSLTDPKGVVLDELLKLLQVKSRVFVVLQASLPMVTHLFREARKIGLMGKDSAWIINEGSTSTFESYNTTILSSMEGALGIKTYYSTSSIAYTQFQENFQAGTSKPGLYALKAYDSITMIAKALEKMNANSSNSRVFMEKMLSSNFDGLSGSISFKESQLSYIPRMRVINVVNNRYTELDFWTPELKFERSLKTLEDIEKRDDLGTRNITGTVVWPGGLNSTVHIPMGWKLPTEINPLKVAVPVNPAFENFVKEVSQNQYQGFCIDLFYSIRQILSENYGDLLPYEFHSFNESYDSLFQNVINESYDAIVGDVTILANRSKYVSFTQPYTESGLSLILPVETEGSAWLFMKPFSWQMWIATSSILIYTMFIIWFLEHKLNPEFGGPLKNQISTTLWFAFSSLFFSHREKINSNSARVVVGVWLFLVFVLTSSYTASLSSMLTVTKLKSGRDINWLRQNNLPVGCDNVSTFVKDYMVNVYKLHPKQIIDVDGENDIVEKFKTKQIVALFLESPYEKVFLNKYCNQYSSTTAAYRFGGMGFVFQKGSPMAKDFSEAILTLAEDGTLKKLENEWLTPSNECSNTSSPETESLILSNFLGLYAICAATSTICLVLALLTKWHHHHHHNQEEEAASQQERKDEDSVLKRAFRLSTELYNGSLKTLDRAATTQGVRLRNNSSRWESVSTSEYVANNPQRSHSAVIRML 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00205 881 Pfam Ligand-gated ion channel 753 782 IPR001320 GO:0015276|GO:0016020
Adu10g00205 881 PANTHER GLUTAMATE RECEPTOR 60 877 - -
Adu10g00205 881 SUPERFAMILY Periplasmic binding protein-like II 406 752 - -
Adu10g00205 881 CDD PBP1_GABAb_receptor_plant 34 371 IPR044440 -
Adu10g00205 881 Pfam Receptor family ligand binding region 38 351 IPR001828 -
Adu10g00205 881 SMART GluR_14 418 753 IPR001320 GO:0015276|GO:0016020
Adu10g00205 881 Gene3D - 695 759 - -
Adu10g00205 881 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 60 877 - -
Adu10g00205 881 Pfam Bacterial extracellular solute-binding proteins, family 3 418 752 IPR001638 -
Adu10g00205 881 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 21 59 - -
Adu10g00205 881 Gene3D - 120 363 - -
Adu10g00205 881 Gene3D - 57 343 - -
Adu10g00205 881 PANTHER GLUTAMATE RECEPTOR 21 59 - -
Adu10g00205 881 SUPERFAMILY Periplasmic binding protein-like I 54 362 IPR028082 -
Adu10g00205 881 Gene3D - 526 659 - -
Adu10g00205 881 PIRSF IGluLR_plant 2 59 IPR017103 -
Adu10g00205 881 PIRSF IGluLR_plant 55 879 IPR017103 -
Adu10g00205 881 Gene3D - 412 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00205 Adu-Chr10 2675645 2678880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00205 50 801 Ion Channels AT2G29120 32.494 4.45e-118 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00205 - - gmx:100818078 1162.52