Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00180 ATGCATACTCCTCCTCCTCCATCATCATCATCATCATCTTCTTCTTCTTCTAATTCTATTTGGGTATTGTCTAGCATAAAGCTTCAATTCTTTGCACGAATCAGAAGGTTCCTCCAATCAAAAGCGACACGAAAGCGCCGAAACCAATCAAGAAACAGAGCTGAGCAGAGCAACAACGACAATAACAAGGTCGAAAAAGTTGTTGAAACGGTTCAAGTCATGGAGAAGCATGAGGAGGAGAAGGAAGAAGAGGAGGACTCTGCTATCATATTGCAGAGGACAGTGAAGAAGCTTCACTTTGGAAGCTGTGAAGAGAAGGAGGTGGCAGCCAAGGATATTGGAAATTTGGCAAAAGAAGATTTGAAGGTTAGAAAGTTGATAACAGAACTCGGTGTGGTGCCTGTGTTGGTCTCTATGGTGGCTTCCGACGTGGCCACCCGTCGCAGAGCGGCGTTGGTGGCGTTGATCCACCTTGCTGATGGAACTTACACGAACAAGGCTATGATAGTGGAGGCAGGAATATTATCCAAGCTGCCAAACACAGTTGACAATGTAGATGAATCAACAATCAATGAATTTTCTGAGTTGCTGTTATCGTTGTCTTCACTAGCAAACACCCAATTCCATTTTCCTTCATTGGACTTTCTACCATCACTAAGACACATTCTTGAGTCAAACTCATCAAGCTTAGACACAAAAACATCATGTTTGGGTGCCCTATACAACTTTTCAAGCGTGTTAGAGAACGCGGGAGCTTTGGTTTCATGTGGGATTGTTCCTATTTTATTAGAACTATCCTCAAGAAAAGAAACTTCAGAGAAAGCATTGGCAAGTCTAGGGAACTTGTTAGTGAGCATGATGGGGAAGAAAGCAATAGAGAATAGTTGTTTAGTGCCAAAGAACTTCATTGAGATCTTGTCATGGGAAGACAAACCGAAATGCCAAGAGTTATCGGTTTATATATTGATGATCCTAGCGCATCAAAGTTCAAGTCAAAGGGAGAAAATGGCAGAGGCTGGCATTGTTCCTGTGCTTCTTGAAGTGGTTCTGTTGGGAAGCTCTTTGGCTCAGAAGAGAGCATTGAAGCTATTGCAATGGTTCAAGGATGAGAGGCAAACCAAGATGGGGCCACATTCGGGGCCACAAACACCGAGGTTTGCATCGATGGGGTCACCGGTGAATCAAAGAGAAGCAATGGAAGGGAAGAAGATGATGAAGAGTTTGGTTAAACAAAGCTTGCATAGGAACATGGAGATTATTACTCACAGGGCTAATGCTGCTGGAGACTCTTCTAGATTTAAGTCATTGCCAGCTCTCCTCGTCTTCTCCGGCGGGACCGCCTTCAACGGCGTCGTCGAGGACCTCAAGACCTTCACTACCCGCGTCGCCCACGTTCTCCCCGTCTCCGATGACGGCGGAAGCACCGCCGAGATCGTTCGCGTCCTTGGTGGTCCTGCTGTTGGAGACATACGTTCGAGGTGTCTGAGGTTGTCTGATCAGAGCACAGCTGAAGCTCTTGCAGTTCGGAATCTACTTGGTCATCGTCTACCTCTTGATCCACTCAAAGCTAAATCTGAATGGTACTCCATTGTGGAAGGTGATCACACACTATGGAAAGGTGTTTCGAAACCTTACAGGGAGACTATTCGATCTTTTTTGGTTTATTTTCAGAGTCAGATTCTACGCCGGGCTGAAGAATCATTTTGTTTCAGCAATGGCAGCATCGGGAATTTCTTTTTTGCAGGCGCACGTATATTTTTTCGGTCCTTGGATGCTGCAATATTTTTGTTTTCACGTGTTTCAGATATTCCCCCTGAAAGCCTGGTTCTCCCTGTAATTTCCACCAACGACAGGCTTACCTTAGGGTGCGAATTATGGGATGGAACTATTATAAGGGGACAAAATGAAATTTCTCATCCAACCAGGGGAACGACGGAGCTGATTAACAAGGATAGCTTTTCCACTCCAGCGCTTCCTTCAAAAATAAAACGTGTCTTCTACATGTCAAGTGAGGGAAAAAATTTGCTCCATGAGGTATTTCCTTCACCTAATGCAACTGTATTAGAGCAGTTAAGTAATGTGGACTGCATTGTGTATGCCATGGGTTCCCTTTTCACTTCAATCTGCCCCTCGTTGGTCTTATTGGGAATTGGGGAGATTATTTCATCAAGGTCTTGCCTCAAGGTACTTATGTTAAATGGCACACCTGACCGGGAGACTAACGGGTTTTCGGCTTCTTGTTTTGTTACTGCCATCACGGATGCTCTAAATCGAACATATGGAGATCCTTGCAATCGGCTACAGAATCCTCCGAGTCAGTATATCAATACCATTTTGGTGCCAAGAAATAGTTCAGTTCCAGTTGATGTTGACCGATTGAATGCCCAAGGAATATTTGATGTGATTGTTGTTGACTCCCTACGTGATTCCAAAGTGGGTATAATATATGACCCAAAATCGTTGATAAGAGCTCTCGCTGACTTAATTGACAGATACATGAAGTCAAGAGTCAAGGAATTAATCGATGCTAGATGA 2535 0.4426 MHTPPPPSSSSSSSSSSNSIWVLSSIKLQFFARIRRFLQSKATRKRRNQSRNRAEQSNNDNNKVEKVVETVQVMEKHEEEKEEEEDSAIILQRTVKKLHFGSCEEKEVAAKDIGNLAKEDLKVRKLITELGVVPVLVSMVASDVATRRRAALVALIHLADGTYTNKAMIVEAGILSKLPNTVDNVDESTINEFSELLLSLSSLANTQFHFPSLDFLPSLRHILESNSSSLDTKTSCLGALYNFSSVLENAGALVSCGIVPILLELSSRKETSEKALASLGNLLVSMMGKKAIENSCLVPKNFIEILSWEDKPKCQELSVYILMILAHQSSSQREKMAEAGIVPVLLEVVLLGSSLAQKRALKLLQWFKDERQTKMGPHSGPQTPRFASMGSPVNQREAMEGKKMMKSLVKQSLHRNMEIITHRANAAGDSSRFKSLPALLVFSGGTAFNGVVEDLKTFTTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDQSTAEALAVRNLLGHRLPLDPLKAKSEWYSIVEGDHTLWKGVSKPYRETIRSFLVYFQSQILRRAEESFCFSNGSIGNFFFAGARIFFRSLDAAIFLFSRVSDIPPESLVLPVISTNDRLTLGCELWDGTIIRGQNEISHPTRGTTELINKDSFSTPALPSKIKRVFYMSSEGKNLLHEVFPSPNATVLEQLSNVDCIVYAMGSLFTSICPSLVLLGIGEIISSRSCLKVLMLNGTPDRETNGFSASCFVTAITDALNRTYGDPCNRLQNPPSQYINTILVPRNSSVPVDVDRLNAQGIFDVIVVDSLRDSKVGIIYDPKSLIRALADLIDRYMKSRVKELIDAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00180 844 SUPERFAMILY CofD-like 438 826 IPR038136 -
Adu10g00180 844 Pfam 2-phospho-L-lactate transferase CofD 441 795 IPR002882 GO:0043743
Adu10g00180 844 Coils Coil 47 94 - -
Adu10g00180 844 PANTHER MATERNAL EFFECT EMBRYO ARREST 18 409 831 - -
Adu10g00180 844 MobiDBLite consensus disorder prediction 373 392 - -
Adu10g00180 844 MobiDBLite consensus disorder prediction 42 64 - -
Adu10g00180 844 CDD YvcK_like 439 827 - -
Adu10g00180 844 Gene3D - 431 842 IPR038136 -
Adu10g00180 844 SUPERFAMILY ARM repeat 96 367 IPR016024 -
Adu10g00180 844 SMART arm_5 120 160 IPR000225 GO:0005515
Adu10g00180 844 SMART arm_5 162 202 IPR000225 GO:0005515
Adu10g00180 844 SMART arm_5 245 284 IPR000225 GO:0005515
Adu10g00180 844 MobiDBLite consensus disorder prediction 376 390 - -
Adu10g00180 844 Gene3D - 55 381 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00180 Adu-Chr10 2444830 2453834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00180 104 384 U-box Gene Family AT1G67530 27.083 2.31e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00180 - - adu:107468223 807.364