Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00153 ATGAACCCCTTCTTTTACAGATTCTTGATTCTCCTTGCTCTGTTTTCTCTCGTGGAATCTTCTTCATCATGCAGCAGCAACAATAGAGACCACGAGCTTGTCTTAAAAGCCTTCCAATATGTCTCTGGATTCAAACCTTCATGGTTCCAAACAACACACCAACCTTCTTCTTCTTCTTCTAACTGTTCGGTACAAGAGTCATCTCCCATTATTAAGAACATAGAGCTTCCTTCAAGAAACTTAAGCGGCAATATCTCATGGAGCTACCTAAAGAACATGTCAAACCTGCAAGTTCTCGATCTCTCCGGAAATTCCCTGCAAGGCCAAGTATCAAACATGTTGTGGGCAACTCCAAACTTGTTAGTAGTAAACCTCTCCAGAAACAGGTTCGGAGGAACCATTGCTTTCAACCAACTCACAACCGTTTCATCATCGCTTCAAGTTCTGAACCTCTCACACAACAGGCTCACCAATCAGGTTCACCTCTCCGGTTTCACAAACCTCAAAACCCTCGACCTTTCTCACAACCACCTTGGAACCTTACCTTCGGGGTTCCAGAACCTCAAAAAACTCCAACACCTCGATCTCTCTAACTGCAACATCGAAGGACCAGTGAAACAAGTCTCTTCCCTTCACTCACTCACCTACCTCGACCTCTCTAACAACACGTTGAATGGAACCTTCCCTTCAGATTTCCCTCCATTGAACACCATCAAGTTCCTCAACATCTCACACAACAACTTCATCAAATCCACAGAACTAAGCCCAAACAAGTACAAGAAGTTCGGCCAATCGGCGTTCATAAACGCCGGCAACAACTTCCACTTGAACTTCAACGCATCCAACCTCCATTCAAAGAAGCAACACCACCAACCACCAATGCAACCAACTAATAACAAACACCACAAGCACAAGTCAAAACACAAAACCGTTTTGCTTGTGGCGGCATCGTGTGCTTCAGGGGTAGTTTTGGTATTGTCGTTGAGCGCGTGCATGTTACGGTGTTACTGTAGGAAGAAGGAAGAGGCGAAGAGGAACAAGTGGGCCATATCGAAACCTGTAGCGTTGACGAGCATCAAGATGGAGAAATCAGGGCCGTTCGCCTTCGAGACGGAGTCAGGGACGTCATGGGTGGCTGACCTGAAAGAACCGTCGTCGGCCGCCGTCGTGATGTTCGAGAAGCCGTTGATGAGTTTGACTTTCAAGGACTTGATGAGTGCCACGTCACACTTCGGTAAAGACTCACAGCTTGCTGAGGGTAGATGTGGGCCCGTGTACCGAGCTGTTCTACCAGGAGATATCCACGTGGCAATCAAGGTTTTGGAAAACGCAAGAGACGTTGATCACGATGACGCTGTCAACATCTTCGTTGACCTCTCCAGGCTGAAGCACCCTAACCTCTTGCCCCTCTCCGGTTACTGCATTGCAGGGAAGGAGAAGCTGGTGATGTATGAGTTCATGTCAAACGGGGATTTAGGTAGGTGGTTACACGAGCTACCAACGGGTGACACCAACGTGGAAGATTGGAGTGGTGACACGTGGGAGATTCAAAACGGTATCGCGTCACATGAAAAGATGGCTTGGCCAACACGACACCGTATCGCCGTTGGTATGGCGCGTGGTCTCGCATTCCTCCACCACGCCGGATCCAGGCCTGTCGTTCACGGCCACCTGGTAACATCTAATATTTTACTCTCTGATGACTTCGAACCACGAATCGCTGATTTCGGGTTGAGGAAATTCGGGCAGGAACAGAACGCGCCGAATTGCAGCACCGAGACTGACGTGTACTGCTTCGGTGTGGTGCTGATGGAGCTTCTGACGGGACGGCATGGCACGGCGGAGACAGTGGTGTCGGTGAGGAAGCTTGTTAGGGAGGGCCACGGTGTTCGCGCGTTGGATGAGAGGCTCGGATTCGGTGACTCAGAGGCTGAGATGGTGGAGAGCCTCCGAGTCGCGTATCTTTGCACCGCCGAGTCGCCGGCGAAGAGACCCACCATGCAGCAGGTCTTGGGTCTTCTCAAGGACATTCATCCGAGTGGCGGACTCGACTGTTACTATAGGAGGTGGCAAAATTGGCAATTGAGTTTTTGA 2094 0.4976 MNPFFYRFLILLALFSLVESSSSCSSNNRDHELVLKAFQYVSGFKPSWFQTTHQPSSSSSNCSVQESSPIIKNIELPSRNLSGNISWSYLKNMSNLQVLDLSGNSLQGQVSNMLWATPNLLVVNLSRNRFGGTIAFNQLTTVSSSLQVLNLSHNRLTNQVHLSGFTNLKTLDLSHNHLGTLPSGFQNLKKLQHLDLSNCNIEGPVKQVSSLHSLTYLDLSNNTLNGTFPSDFPPLNTIKFLNISHNNFIKSTELSPNKYKKFGQSAFINAGNNFHLNFNASNLHSKKQHHQPPMQPTNNKHHKHKSKHKTVLLVAASCASGVVLVLSLSACMLRCYCRKKEEAKRNKWAISKPVALTSIKMEKSGPFAFETESGTSWVADLKEPSSAAVVMFEKPLMSLTFKDLMSATSHFGKDSQLAEGRCGPVYRAVLPGDIHVAIKVLENARDVDHDDAVNIFVDLSRLKHPNLLPLSGYCIAGKEKLVMYEFMSNGDLGRWLHELPTGDTNVEDWSGDTWEIQNGIASHEKMAWPTRHRIAVGMARGLAFLHHAGSRPVVHGHLVTSNILLSDDFEPRIADFGLRKFGQEQNAPNCSTETDVYCFGVVLMELLTGRHGTAETVVSVRKLVREGHGVRALDERLGFGDSEAEMVESLRVAYLCTAESPAKRPTMQQVLGLLKDIHPSGGLDCYYRRWQNWQLSF 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00153 697 Pfam Leucine Rich Repeat 95 111 IPR001611 GO:0005515
Adu10g00153 697 SUPERFAMILY L domain-like 67 286 - -
Adu10g00153 697 Pfam Leucine rich repeat 145 201 IPR001611 GO:0005515
Adu10g00153 697 SMART LRR_typ_2 93 116 IPR003591 -
Adu10g00153 697 SMART LRR_typ_2 165 187 IPR003591 -
Adu10g00153 697 SMART LRR_typ_2 211 234 IPR003591 -
Adu10g00153 697 Gene3D Transferase(Phosphotransferase) domain 1 487 682 - -
Adu10g00153 697 PRINTS Leucine-rich repeat signature 168 181 - -
Adu10g00153 697 PRINTS Leucine-rich repeat signature 211 224 - -
Adu10g00153 697 Pfam Protein tyrosine and serine/threonine kinase 414 582 IPR001245 GO:0004672|GO:0006468
Adu10g00153 697 ProSiteProfiles Leucine-rich repeat profile. 145 166 IPR001611 GO:0005515
Adu10g00153 697 Gene3D Phosphorylase Kinase; domain 1 371 486 - -
Adu10g00153 697 Gene3D Ribonuclease Inhibitor 34 141 IPR032675 -
Adu10g00153 697 ProSiteProfiles Protein kinase domain profile. 411 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00153 697 PANTHER KINASE, PUTATIVE-RELATED 4 684 - -
Adu10g00153 697 SUPERFAMILY Protein kinase-like (PK-like) 399 674 IPR011009 -
Adu10g00153 697 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 684 - -
Adu10g00153 697 Gene3D Ribonuclease Inhibitor 142 261 IPR032675 -
Adu10g00153 697 ProSiteProfiles Leucine-rich repeat profile. 167 189 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00153 Adu-Chr10 2192832 2195172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00153 70 677 Receptor kinase-like Gene Family AT5G07280 30.862 2.42e-70 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Adu10g00153 PK_Tyr_Ser-Thr 3.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00153 - - gmx:100778920 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04661 03 135852059 135854710 Adu10g00153 10 2192832 2195172 PCT