Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00147 ATGGATCAAGCTGCAAGTGAGGGGAGTGTTGAGGTAATGGATCCTGTTCATGAAAGAGTTGATGATAATTTGAGTCATGAACCTGATGGGGCTGCAATTGATGCAGTAGGTAGGGGTAGCTTGGGTGAGAGAGCCATTATAAGTGGAGAAGTTGGAACTTCAGAACAAAAGGGTAAGGATTTGGGATCAGATAAGGAGTTAAAGGAGGAACCTGAGGAAGTTGAGAGTGGGAAGAAGTGTGATCACCAAAAAAACAGTGAAACAATGTCTGAGGTTGATCAAGGAACTAGTTATAATTCAAGCAATTTGGTTAATCAGCAAGTGGTTGAAACTGTGGTTGTAATAGAGGCTGTTCAGAGTGAGTGTGTTAATAGGGACAGTATGAAATTGGAGCTGAAGGTAAATGAATCAGGGTTGAGCAAAGTATCTGTGAGAGCCCCCAAAGGGGTTTCTGAAATGACAGATAAGAATTCTTGTGTGATTGATATAAGGTGCACCAACCACAAACGGTTTAGTGAGAGTTCAGAAGGTGAAAGGATTTGTAGGATTTGCCACCTTGCTTCTGGGAGACCATCAGATGCAACAGCCGTTGGAACTGCCAATGGTGCTACTAGTACTGATTTGATTCAGCTTGGTTGTTCATGTAAGGATGAGCTTGGCATTGCGCATGTTCATTGTGCTGAGGCCTGGTTCAAGCTTAAAGGAAACAGATTATGTGAAATATGTGGCGAGATTGCGAAAAACGTGTCGGGTGTTGCTGATGCTGGATTCATGGAAGAGTGGAACGAAGGGAGATTCATGGACCAAGATAACTCATCACGCAGGTTTGGTGGATGTTGGCGAGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTTGTAATTGCTTTTGTTCTTCCATGGTTTTTTCGTGTAAATATGTTCTAG 927 0.4293 MDQAASEGSVEVMDPVHERVDDNLSHEPDGAAIDAVGRGSLGERAIISGEVGTSEQKGKDLGSDKELKEEPEEVESGKKCDHQKNSETMSEVDQGTSYNSSNLVNQQVVETVVVIEAVQSECVNRDSMKLELKVNESGLSKVSVRAPKGVSEMTDKNSCVIDIRCTNHKRFSESSEGERICRICHLASGRPSDATAVGTANGATSTDLIQLGCSCKDELGIAHVHCAEAWFKLKGNRLCEICGEIAKNVSGVADAGFMEEWNEGRFMDQDNSSRRFGGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00147 308 SUPERFAMILY RING/U-box 176 244 - -
Adu10g00147 308 MobiDBLite consensus disorder prediction 1 99 - -
Adu10g00147 308 SMART ringv_2 180 243 IPR011016 GO:0008270
Adu10g00147 308 Pfam RING-variant domain 181 242 IPR011016 GO:0008270
Adu10g00147 308 MobiDBLite consensus disorder prediction 12 28 - -
Adu10g00147 308 PANTHER ZINC FINGER, RING-CH-TYPE 1 308 - -
Adu10g00147 308 ProSiteProfiles Zinc finger RING-CH-type profile. 173 249 IPR011016 GO:0008270
Adu10g00147 308 MobiDBLite consensus disorder prediction 57 88 - -
Adu10g00147 308 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 308 - -
Adu10g00147 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 165 253 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00147 Adu-Chr10 2129330 2131748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00147 161 307 C3H Transcription Factor Family AT5G05830 40.000 2.53e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00147 - - gmx:100791720 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00147 10 2129330 2131748 Adu10g00147 10 2129330 2131748 ECH
Adu03g04665 03 135885439 135887767 Adu10g00147 10 2129330 2131748 PCT