Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00145 ATGGCATCGGAGAAGAAGCTTGCGAACCCTATGAGGGAAATCAAAGTGCAGAAGCTTGTCCTCAACATCTCCGTCGGCGAGAGTGGCGATCGTCTCACCAGAGCTTCCAAGGTCTTGGAACAGCTCAGCGGCCAAACCCCTGTCTTCTCCAAGGCTAGGTACACTGTGCGTTCATTTGGAATAAGGCGTAATGAAAAGATTGCTTGCTATGTCACCGTTAGGGGAGACAAGGCCATGCAACTCCTTGAGAGTGGGTTGAAGGTCAAGGAGTATGAGCTGCTTAGGAGGAATTTCAGCGATACTGGCTGCTTTGGTTTTGGAATCCAGGAGCACATTGATCTCGGGATCAAGTATGATCCTTCTACTGGAATCTACGGCATGGATTTCTTTGTCGTCTTAGAGCGTGCTGGATACCGTGTGGGTAGGCGGAGGAGACGAAAGTCCCGTGTTGGAATTCAACACAGGGTCACCAAAGAAGATGCAATGAAGTGGTTTCAAGTTAAGTACGAAGGAGTTATTCTTAACAAGTCCCAACAAATTGTATCCTAG 549 0.4827 MASEKKLANPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRRKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQIVS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00145 182 SUPERFAMILY RL5-like 9 173 IPR022803 -
Adu10g00145 182 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 181 - -
Adu10g00145 182 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Adu10g00145 182 Pfam Ribosomal protein L5 9 62 IPR031310 -
Adu10g00145 182 Gene3D - 2 177 IPR022803 -
Adu10g00145 182 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Adu10g00145 182 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Adu10g00145 182 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 181 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00145 Adu-Chr10 2116154 2117626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00145 1 181 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 93.923 2.38e-126 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00145 K02868 - gmx:100810082 331.257