Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00121 ATGGGAGCAGCAACAGTGGAAAGAACTCGCAGCAGAAAGAAGGCATCATCGAGAGGACACCATAAATTTGTTGGTGTTCGTCAGAGGCCATCAGGGAGATGGGTGGCTGAGATCAAAGATTCTTTGCAGAAGGTTAGACTCTGGCTCGGAACCTTTGACACGGCTGAAGACGCCGCTAGAGCTTATGACACTGCTGCCAGAGCCTTAAGAGGTGTCAATGCAAGGACAAACTTTGACTTGCCTGCTGCAGAGTCTGGTGGCGCCGCTGCTTCGAAGCGCGGCGCCGGTTCCGGCTTCATTCCTGATTGCACTGAGCCTTTTTCATTTGAGGATTCCAGTGAGGCTGTGGCTGATGGAGATGGCCTTCTTGGTGCACTCAAGGCTAAACTGTTTGATGTAAAGGGCGGAGGAGGGAGGTTTCCTCCGCCGGTTGTTCAATCAAGCATGGTTTCAAGGTCAACTCAGAATCAGAATCAGAATCAGAATCAGAACTGTTCTGTGAAGAATAAAGAGTTGTTTTCTTCATCAGTAGTAATGCTTCCTAATAAGATGAATAATTATAATAATAATGCAAATTGCAGCAGCACTAGTAGTTTGCCATGTTTGATTAGTACTTCATCAAACACTTGTTCTAAGAGTGTGATTATGACCCCTGCTAATGCTAATCATGATGATCATGAAGGAACTTTTAATAGCTCTCATCATCATCATCAACAATTTTGTCAAACCCCATCACCTATGACAACATGGTCAAATAATGAAGTATCATATGATCAATTACCATGGACTCATCATCAAGAGAATGGTTTTCTTGCATCTTCAAGCACAGCTACTCTTACATGGCCTAATCATCTCTCAGGGGTAAATGAGTCAAATACTGTAGATAATATGGGATATAATACAGATTATCATAATCCTGGAACATCAAATAGCAGCAGGAGTAACAGTAGTATGCAATTTCCTCTGATTGGTGGAGTAAGCAATGAAGGATTTTGGACAATGGAGCAGCAACAATTTCTGCAATGTGAAGGCTCCAATTGGTTTGCTTCTAATGGATATTGGGATCCTCTTCTCTTTATAGTTGCATTTGCTGCAATGAGGAATTGTGATGAATGGAAACCTTTTGTAGTAATGGTAGCAATTGATTTTTGTTTTGCTGCAGTGAACATTATTCTCAAGAAAGTTCTTGAAGAAGGAATGAACCATTTGGTTTTTATTACATACCGTTTATCAATTGCTACCATTCTCTTAGCTCCAATCGGATACTTTAGAGAAAGAAACAGTAGGCCAAGGCTCACATTTCGAGTTCTATGTTACATCTTCTTCAGTGCCATTGTGGGGGCATCAGTGACACAATATTTCTTCCTGCTGGGGATCCAATATACTTCTGCTACCTTTGCTTGTGCATTCATCAACATGGTGCCTGTGATCACGTTCATTATGGCATTACCATTCGGGTTAGAGAGTGTGAACATCAAGTGCAAGAGTGGGAGAGCCAAGATTCTTGGGACATTGGTGTGCATAGGGGGTGCATTGTTGCTGACACTCTATAAAGGAAAGCCCTTGTTTAACTATTCTTCTGCAACTTCTATAGCAAAGACAGGAACAAGTAGTAGTAGTAGTAGTGGAAGATGGACCATTGGTGTTGTGGCTTTGATTCTTGGAACATTGTTTTGGTCATCTTGGTATATAGTACAATCAAGCATAAGCAAGAGGTTCCCATGTAAATACTCAAGCACAGCCATGATGACCTTCTTTGGAGCCATTCAAGCAGCTTTCATAAGCTTGTCTATTCAACACCATGATTTCTCAATTTGGGTTCTCAAGGGAAAGCTTCCAATAATTGCTGTTCTCTTCTCTGGGATGATTGGATCAGGATTGTGTTTTGTGGGGATGTCATGGTGTGTGAAGAAGAGGGGTCCAGTGTTCACTGCAGCATTCAGCCCTCTTGTTCAGATCATGGCTGCCATGATTGATATCCCTATCTTGCATGAGCAACTACATCTTGGAAGTGTGTTGGGATCAATGTTGGTGATGATGGGATTATACATTCTTCTGTGGGGTAAGAGCAAGGAGATTCAGAATCGTGTTATCAAGTTAGTCCAAGACTCTGAACAAAGTCAACAAACCAAGGAACAAGATCCGGAAATACAAGAAGCTACGGTTTCTTGTGATTACCGGTGTCACTAA 2190 0.4201 MGAATVERTRSRKKASSRGHHKFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDTAARALRGVNARTNFDLPAAESGGAAASKRGAGSGFIPDCTEPFSFEDSSEAVADGDGLLGALKAKLFDVKGGGGRFPPPVVQSSMVSRSTQNQNQNQNQNCSVKNKELFSSSVVMLPNKMNNYNNNANCSSTSSLPCLISTSSNTCSKSVIMTPANANHDDHEGTFNSSHHHHQQFCQTPSPMTTWSNNEVSYDQLPWTHHQENGFLASSSTATLTWPNHLSGVNESNTVDNMGYNTDYHNPGTSNSSRSNSSMQFPLIGGVSNEGFWTMEQQQFLQCEGSNWFASNGYWDPLLFIVAFAAMRNCDEWKPFVVMVAIDFCFAAVNIILKKVLEEGMNHLVFITYRLSIATILLAPIGYFRERNSRPRLTFRVLCYIFFSAIVGASVTQYFFLLGIQYTSATFACAFINMVPVITFIMALPFGLESVNIKCKSGRAKILGTLVCIGGALLLTLYKGKPLFNYSSATSIAKTGTSSSSSSGRWTIGVVALILGTLFWSSWYIVQSSISKRFPCKYSSTAMMTFFGAIQAAFISLSIQHHDFSIWVLKGKLPIIAVLFSGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPILHEQLHLGSVLGSMLVMMGLYILLWGKSKEIQNRVIKLVQDSEQSQQTKEQDPEIQEATVSCDYRCH 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00121 729 PANTHER WAT1-RELATED PROTEIN 374 712 IPR030184 GO:0016021|GO:0022857
Adu10g00121 729 SUPERFAMILY Multidrug resistance efflux transporter EmrE 615 691 - -
Adu10g00121 729 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Adu10g00121 729 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Adu10g00121 729 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Adu10g00121 729 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Adu10g00121 729 PANTHER WAT1-RELATED PROTEIN 374 712 - -
Adu10g00121 729 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Adu10g00121 729 SUPERFAMILY Multidrug resistance efflux transporter EmrE 408 518 - -
Adu10g00121 729 Pfam EamA-like transporter family 547 686 IPR000620 GO:0016020|GO:0016021
Adu10g00121 729 Pfam EamA-like transporter family 377 515 IPR000620 GO:0016020|GO:0016021
Adu10g00121 729 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Adu10g00121 729 MobiDBLite consensus disorder prediction 1 26 - -
Adu10g00121 729 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Adu10g00121 729 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00121 Adu-Chr10 1260319 1268951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00121 371 694 Nodulin-like Gene Family AT1G11460 39.077 1.29e-80 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu10g00121 EamA 2.8e-11 CL0184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00121 - - gmx:100803670 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04668 03 135917519 135919805 Adu10g00121 10 1260319 1268951 PCT