Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00108 ATGATGATGAAGTGGGGAGGAAGAAAAGCTGGTTCTTCTTCTCCTTCTGTGTCTTCTCATCACCATGCTTCTTCTTTTTCTTGGTTCTCTAAGTTAAAGCACATGAGAATCAACTCATCATCATCCGAGCCAACTACTACTACTCATCATGCAAACATCAAGAAGCAGAAGCCACCATACCAGAATCATACTTCTGATGCTGTTACTACTGCTTCTTCTACTCTTGCTGATGATGCTTCTTCTTCTTTATTCCACGATGAAGATGATTTTATTGACTCTTCTTCAAGTTTCCCTGCTGCTGCTAGAAGAAACAGTAGTGCTATGAAGCATACAGCAAGAGAAGGTGCTCTCATCAGCAACAACAAGAACAAGTTGAAGAAGGAGAACAAGGAGAGTGGTATTATTCCAAAGGAAGAAAGAAAATTTGTGGATGATAGGAAGGTTGAAATGGAGATGCAAGAGTACACTAGAGATGACAAGGAATATGAAAACTTAAGGAGGAGATTTGAGAGGAAAGCTCAAAAGGTTTTGCAAGAGCAACTCTTCAACTTAGAAAAAGAAAGAGGAAGAGAATCAAGAAAATTAGTACAAGAGATCAAAGATGTGGAGATGCAGTTGGATTCACCAAGAACAATATGCACACCAAGGATACATTATTCACTTCCATCTTCATCTGATTCGAAGAGTTCGAATTCTGTTAGAAGTAAGAAGAATAATAATATTTTGGAGAAGAAAATGATGATGAATCCTACTGATGAGGAGTTGAACTTGAACTTGAACTTGAAGGTGAAGACCAAGAAAAAGAAGCAAGATGGAAGCAGCAGCAGAGAAATTATTCATCAGAGGAGGAAATCAAAGCATAGCCCCAGAATCAGAATACATTCTCCAAGGATGTCTTCTCCCAAGATTGATCAAGTTTGCAGAATAAAGGCTATAGAAGACATGAAGAAAGCAAGACTGAAGATGAAGAAAGAAAGAGAGGAGATTATTGTGCAGGAAGCACTACTCACAAAAGGGTCAGAAGATAGATTTGCTGTTATAAAATGTTCATTGGATCCAAGAAAAGATTTCAGAGACTCTATGATTGAGATGATCATTGAGAAGCAGATTAGAAACCCAGAAGAAATGGAAGAGCTTCTGGCATGTTATCTGACATTGAATGCTGATGAGTATCATGATCTCATCATTCAAGTTTTCAGGCAAGTTTGGTTTCAAATGAGCTATGGTGCTTAA 1233 0.3804 MMMKWGGRKAGSSSPSVSSHHHASSFSWFSKLKHMRINSSSSEPTTTTHHANIKKQKPPYQNHTSDAVTTASSTLADDASSSLFHDEDDFIDSSSSFPAAARRNSSAMKHTAREGALISNNKNKLKKENKESGIIPKEERKFVDDRKVEMEMQEYTRDDKEYENLRRRFERKAQKVLQEQLFNLEKERGRESRKLVQEIKDVEMQLDSPRTICTPRIHYSLPSSSDSKSSNSVRSKKNNNILEKKMMMNPTDEELNLNLNLKVKTKKKKQDGSSSREIIHQRRKSKHSPRIRIHSPRMSSPKIDQVCRIKAIEDMKKARLKMKKEREEIIVQEALLTKGSEDRFAVIKCSLDPRKDFRDSMIEMIIEKQIRNPEEMEELLACYLTLNADEYHDLIIQVFRQVWFQMSYGA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00108 410 MobiDBLite consensus disorder prediction 102 129 - -
Adu10g00108 410 MobiDBLite consensus disorder prediction 37 76 - -
Adu10g00108 410 MobiDBLite consensus disorder prediction 217 245 - -
Adu10g00108 410 Pfam Transcriptional repressor, ovate 350 406 IPR006458 -
Adu10g00108 410 PANTHER TRANSCRIPTION REPRESSOR OFP4 17 406 - -
Adu10g00108 410 ProSiteProfiles OVATE domain profile. 346 405 IPR006458 -
Adu10g00108 410 MobiDBLite consensus disorder prediction 213 299 - -
Adu10g00108 410 MobiDBLite consensus disorder prediction 1 21 - -
Adu10g00108 410 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 345 406 IPR006458 -
Adu10g00108 410 Coils Coil 152 179 - -
Adu10g00108 410 MobiDBLite consensus disorder prediction 259 279 - -
Adu10g00108 410 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 17 406 IPR038933 GO:0045892
Adu10g00108 410 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00108 Adu-Chr10 1096840 1098072 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Adu10g00108 Ovate 8.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00108 - - ahf:112783885 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00108 10 1096840 1098072 Adu10g00108 10 1096840 1098072 ECH
Adu03g04686 03 136079025 136080318 Adu10g00108 10 1096840 1098072 PCT