Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00107 ATGGATGAAGTTCAGGGAAGTTCAAGTTCCTTACCTCCATTTCTCACAAAGACATATGAGATGGTGGATGATCCTTCCACCAATTCCATTGTATCATGGAGTGACAGCAGCAGGAGTTTTGTTGTTTGGAATCCACCAGAGTTTGCAAGGGTCTTGTTACCAAAATTCTTTAAGCACAATAACTTCTCAAGCTTTATCAGACAGCTCAACACTTATGGCTTTAAGAAGATTGACCCTGAACAATGGGAATTTTCCAATGATGATTTTGTAAGAGGTCAACCAAATCTTATGAAGAATATTCATAGGCGCAAACCGGTTCATAGCCATTCTTTGCAGACTCTACATGGACAAGTGGCTATTCCACTAACCGAGTCAGAACGGAAGAGTCTGAAAGATGAGATTGAAAAGCTTAAGCATGATAAACAACAACAGATTCTGGAGTTACAGAGACAAGAACAAGAGTGGGAAAATTTTAAGTTAAAAATAGATTGCACAAAGGAGCGTTTGGAAACAATGGAAAAGAGGCAACAAAATATGATTTCTTCTATTTCTCAAGTGCTGCATAAACCTGGAGCTGCATTAAATCTGTTGACACTGACAGAAAACATGGAAAGAAAACGAAGGTTGCCAAAAGGCAGCAGTCACTTTACTGATGAAGCTACTAGCATTGAAGATCCTATGGAAATATCCCAAGTGTTACCTAGTGAAAATGCAGAGAGTAGTGACTTCGTCACATCATGCATAGAACGAATGAATCAGCTCGAGTCAACCCTGGTATTTTGGGAATATATTGCACAAGATGTGAATGAAACCCTTGTTCAAAGTCATTCAAACTTGGATGTTGATGAATCCACAAGTTGTCCAGACAGTCCAGCACTATCTAGTGTGCAACTCGATGATGAAGTTCAGCCTAAGTCATCCGGGATAGACATGAATTCTGAGCCAGCTTTACCTTCTGATACTGTTGCATTGAAGGAACAACCTGTTGGAACTACCCCTGCAGCTACTGGTGTTAACGACAAATTCTGGGAACAATTCTTGACAGAGAATCCTGGTTCAACAGAACTGCAAGAGGCACAATCAGAAAGAATGGATTCGGACAACAGAAAGAATGAAGGAAAGCCTAGTGCACATGGCAAGTTTTGGTGGAACATGAGGAATGTAAATAATCTTCCAGAACAGATGGGTCATTCTTAG 1197 0.4027 MDEVQGSSSSLPPFLTKTYEMVDDPSTNSIVSWSDSSRSFVVWNPPEFARVLLPKFFKHNNFSSFIRQLNTYGFKKIDPEQWEFSNDDFVRGQPNLMKNIHRRKPVHSHSLQTLHGQVAIPLTESERKSLKDEIEKLKHDKQQQILELQRQEQEWENFKLKIDCTKERLETMEKRQQNMISSISQVLHKPGAALNLLTLTENMERKRRLPKGSSHFTDEATSIEDPMEISQVLPSENAESSDFVTSCIERMNQLESTLVFWEYIAQDVNETLVQSHSNLDVDESTSCPDSPALSSVQLDDEVQPKSSGIDMNSEPALPSDTVALKEQPVGTTPAATGVNDKFWEQFLTENPGSTELQEAQSERMDSDNRKNEGKPSAHGKFWWNMRNVNNLPEQMGHS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00107 398 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 1 385 - -
Adu10g00107 398 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu10g00107 398 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu10g00107 398 Coils Coil 120 168 - -
Adu10g00107 398 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu10g00107 398 MobiDBLite consensus disorder prediction 350 381 - -
Adu10g00107 398 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 385 IPR027725 -
Adu10g00107 398 MobiDBLite consensus disorder prediction 280 316 - -
Adu10g00107 398 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Adu10g00107 398 MobiDBLite consensus disorder prediction 280 314 - -
Adu10g00107 398 Gene3D - 6 104 IPR036388 -
Adu10g00107 398 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu10g00107 398 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu10g00107 398 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu10g00107 398 MobiDBLite consensus disorder prediction 360 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00107 Adu-Chr10 1092779 1094828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00107 7 397 HSF AT4G18880 52.868 6.70e-119 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu10g00107 HSF_DNA-bind 2.4e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00107 K09419 - gmx:100820566 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00107 10 1092779 1094828 Adu10g00107 10 1092779 1094828 ECH
Adu10g00107 10 1092779 1094828 Adu03g04687 03 136082340 136085341 ECH
Adu03g04687 03 136082340 136085341 Adu10g00107 10 1092779 1094828 PCT