Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00102 ATGTCAGATAATAATAACAATAATAACAGAGATGTTGTAATGAGTGTTACCAATGATGAAGATGAGTCAGACACCAAGGTCACTGTGCCTCTTCTGCAAAAGATGGTAGCAGAGGCAGTGGGAACGTTCTTCTTGATATTTGCAGGGTGTGGTTCATTGGTTATGAACCTCAACAACGACAAGGTGGTGACACTTGCAGGAATCGCAACAGTTTGGGGGCTGCTTGTGATGGTGTTAATATACTCTCTTGGACACATATCTGGTGCTCATTTCAACCCTGCAGTTACCATTGCTCTTGCTTCCATAAACAGGTTCCCTTGGAACCAGGTTCCTGCTTATATCTTCTCTCAAGTCCTTGGATCCACACTTGCAAGTGGTGCTCTCAGACTCTTATTTACGGGCAAGGATAACCAGTTTCCCGGAACCGTTCCATCTGTGACTCACGTTCAAGCTCTCGTTATTGAATTCATAATCACTTTCTTTCTCATGTTCGTCATTTCTGGGGTGGCCACTGATAACCGAGCGATTGGTGAATTGGCTGGACTTGCAGTTGGATCTACTATTCTACTAAATGTGCTCGTTGCAGGGCCATTAACGGGAGCATCAATGAACCCTGCAAGATCATTGGGACCAGCTATTGTGCACAGTGAATACAGAGGAATATGGGTGTATTTGGTGTCACCCATTGTTGGAGCTGTGGCTGGTGCATGGACCTACAATTTCGTTAGGTACACAAAGAAGCCGGTTCGTGAGATCATCAAGAGTGCCTCTTTCTTCAAGGGGAGTAAATAG 792 0.4495 MSDNNNNNNRDVVMSVTNDEDESDTKVTVPLLQKMVAEAVGTFFLIFAGCGSLVMNLNNDKVVTLAGIATVWGLLVMVLIYSLGHISGAHFNPAVTIALASINRFPWNQVPAYIFSQVLGSTLASGALRLLFTGKDNQFPGTVPSVTHVQALVIEFIITFFLMFVISGVATDNRAIGELAGLAVGSTILLNVLVAGPLTGASMNPARSLGPAIVHSEYRGIWVYLVSPIVGAVAGAWTYNFVRYTKKPVREIIKSASFFKGSK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00102 263 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 10 261 - -
Adu10g00102 263 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 TIGRFAM MIP: MIP family channel proteins 37 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 Gene3D Glycerol uptake facilitator protein. 1 252 IPR023271 -
Adu10g00102 263 MobiDBLite consensus disorder prediction 1 21 - -
Adu10g00102 263 PANTHER AQUAPORIN NIP2-1 10 261 IPR034294 -
Adu10g00102 263 Pfam Major intrinsic protein 28 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 SUPERFAMILY Aquaporin-like 29 252 IPR023271 -
Adu10g00102 263 CDD MIP 33 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g00102 263 ProSitePatterns MIP family signature. 90 98 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00102 Adu-Chr10 1066697 1068411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00102 29 260 Major Intrinsic Protein MIP AT5G37820 62.069 2.00e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00102 K09874 - gmx:100812577 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00102 10 1066697 1068411 Adu10g00102 10 1066697 1068411 ECH
Adu03g04689 03 136120560 136124455 Adu10g00102 10 1066697 1068411 PCT