Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00087 ATGGGACATGAAGTGGAGGTTGCGCCACCTAAGGCCGGTGAAGTCCGTTTGAAGATTCTCTACACCTCACTTTGCCACACCGATGTTTACTTCTGGGAAGCCAAGGGCCAGACTCCATTATTTCCTCGGATATTTGGTCATGAAGCTGGAGGGATTGTGGAGAGTGTAGGAGAGGGAGTGACTCATCTGAAACCAGGTGACCATGCCCTCCCTGTGTTCACCGCAGAGTGTGGCGAATGCCCTCACTGCAAGTCGGAGGAGAGCAACATGTGTGACCTTCTCAGGATCAACACTGACAGGGGTGTCATGATCCATGATCAAGAATCAAGATTCTCCATTAAGGGAAAACCAATTTACCACTTTGTTGGGACCTCCACATTCAGTGAATACACTGTGGTTCATGCTGGATGTGTTGCAAAGATAAACCCTGAAGCACCACTTGACAAAGTTTGTGTTCTCAGCTGTGGAATCTGCACAGGTCTTGGTGCCACTATCAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTTCTGTTTTTGGACTCGGAGCTGTTGGTCTTGCTTCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATTTAGTTTCCAGCCGATTCGAATTAGCCAAGAAGTTTGGGGTTAATGAATTTGTGAACCCAAAAGATCATAACAAACCTGTACAAGAGGTAATTGCTGAAATGACCAATGGAGGTGTGGATCGTTCTGTTGAATGTACTGGCAGCATCCAAGCTATGATCTCAGCATTTGAACGTGTCCATGATGGTTGGGGTGTTGCTGTTCTTGTTGGTGTGCCAAGCAAAGATGATGCTTTCAAAAGTCATCCTACGAACTTCTTGAATGAGAGGACTCTCAAGGGTACCTTCTATGGTAACTACAAACCCCAAACCGATCTTCCTAATGTTGTGGAGAAGTACATGAGAGGGGAGTTGGAACTTGAGAAATTCATCACTCACACTGTTCCGTTCTCAGAGATTAACAAGGCTTTTGATTTGATGCTGAAAGGAGAGTCCATCAGGTGCATCATTCGGATGGATGAATAA 1074 0.4572 MGHEVEVAPPKAGEVRLKILYTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTAECGECPHCKSEESNMCDLLRINTDRGVMIHDQESRFSIKGKPIYHFVGTSTFSEYTVVHAGCVAKINPEAPLDKVCVLSCGICTGLGATINVAKPKPGSSVSVFGLGAVGLASAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSIQAMISAFERVHDGWGVAVLVGVPSKDDAFKSHPTNFLNERTLKGTFYGNYKPQTDLPNVVEKYMRGELELEKFITHTVPFSEINKAFDLMLKGESIRCIIRMDE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00087 357 PANTHER ALCOHOL DEHYDROGENASE 3 355 - -
Adu10g00087 357 PANTHER ALCOHOL DEHYDROGENASE-RELATED 3 355 - -
Adu10g00087 357 SUPERFAMILY GroES-like 3 164 IPR011032 -
Adu10g00087 357 Pfam Zinc-binding dehydrogenase 183 312 IPR013149 -
Adu10g00087 357 Gene3D - 4 347 - -
Adu10g00087 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 146 320 IPR036291 -
Adu10g00087 357 CDD alcohol_DH_plants 4 354 - -
Adu10g00087 357 Pfam Alcohol dehydrogenase GroES-like domain 13 140 IPR013154 -
Adu10g00087 357 Gene3D - 160 298 - -
Adu10g00087 357 SUPERFAMILY GroES-like 306 354 IPR011032 -
Adu10g00087 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 46 60 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00087 Adu-Chr10 975716 978690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00087 14 347 Monolignol Biosynthesis Gene Families AT1G72680 25.519 7.78e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00087 K18857 - gmx:100801918 684.1