Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00079 ATGGAGACGAAAAACCCTTCGAGGTTTACGCTGATGAAGCAATCATCATTGGCACCAGAACACCGCAGAGAAGAAGGATCAGAGCTCCACAACGATGGTAATGGCGAGGAAGGTATCCATCCGGGTGTGAGGTTGATGTATTCGGCGAACGAGAACGATCTTGAGGGTATTCGTGAAGTTTTGGATTCGGGTGTGAGCGTCAATTTCAGAGACATTGATGACCGTACTGCACTTCACGTTGCTGCGTGTCAGGGATTAACCGATGTGGTTTCTTTGTTGCTCGAGAAAGGAGCTGAAGTCGACGCCAAAGATCGCTGGGGGAGCACGCCACTTGCAGATGCTATATTTTATAAAAACAATGAAGTGATCAAACTATTGGAGCAGAATGGAGCAAAGCCTCTGATGGCCCCTATGCATGTTCATCATGCACGTGAAGTACCAGAATATGAAATCAATCCTAAAGAACTACTAAATAATAATATTTTTCTTAAATGGCAGGGCACTTTCTGTAGTGCATTCTGGCGTGGGACAGAGGTTGCAGTAAAAAAACTTGGGGAGGATGTAATTACTGATGAGGAGAAAGTGAAGGCCTTTAGAGACGAGCTTGCACTATTCCTGAAGATCCGGCATCCAAATGTAGTTCAGTTTCTGGGTGCTGTGACACAGAGTAGCCCGATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTCCGTGCATTCTTGGGAAGAAAAGGAGCTTTGAAACCTTCAACAGCTGTGAAATTTGCACTTGATATTGCCAGGGGAGTGGGTTATTTACATGAGAATAAGCCGTCACCAATCATTCACCGTGATCTAGAGCCTTCTAACATATTGCGGGATGATTCGGGACACCTAAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTGGCAGTTAAAGAAGACAGACCTCTAACTTGCCAAGATACATCTTGCCGCTATGTTGCTCCTGAAGTTTTCAAACAAGAAGAATATGACACCAAAGTAGATGTATTCTCATTTGCATTAATCCTGCAAGAGATGATTGAAGGTTGTCCACCATTTTCTGCAAAGAAAGAAGACGAAGTTCCTAAGGTATATGCCGCAAAAGAGCGTCCACCTTTTCGAGCTCCAGCCAAGCGTTATGCCCATGGGATAAGAGAATTGATTGAAGATTGCTGGAATGAAAATCCAGCAAAGAGACCAACATTTAGACAAATAATACCAAGGCTGGAATCCATCTACAACACTATTGGTCAAAAAGGACGTTGGAAGGTTAAACCGTTGAAATGCTTCCAGAATCTGGAGGCCTTGTTGAAGAGGGATCGTTCGAATTTTAGCAGCCGAGGCAGTTCATCGCGTTCAAGGTCCAGCCGGATATGA 1383 0.444 METKNPSRFTLMKQSSLAPEHRREEGSELHNDGNGEEGIHPGVRLMYSANENDLEGIREVLDSGVSVNFRDIDDRTALHVAACQGLTDVVSLLLEKGAEVDAKDRWGSTPLADAIFYKNNEVIKLLEQNGAKPLMAPMHVHHAREVPEYEINPKELLNNNIFLKWQGTFCSAFWRGTEVAVKKLGEDVITDEEKVKAFRDELALFLKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLGRKGALKPSTAVKFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDRPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFSAKKEDEVPKVYAAKERPPFRAPAKRYAHGIRELIEDCWNENPAKRPTFRQIIPRLESIYNTIGQKGRWKVKPLKCFQNLEALLKRDRSNFSSRGSSSRSRSSRI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00079 460 CDD STKc_MAP3K-like 167 411 - -
Adu10g00079 460 ProSiteProfiles Ankyrin repeat region circular profile. 73 105 - -
Adu10g00079 460 PIRSF ILK 1 434 - -
Adu10g00079 460 Gene3D Transferase(Phosphotransferase) domain 1 234 455 - -
Adu10g00079 460 MobiDBLite consensus disorder prediction 1 40 - -
Adu10g00079 460 SUPERFAMILY Ankyrin repeat 44 135 IPR036770 -
Adu10g00079 460 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Adu10g00079 460 SMART ANK_2a 37 69 IPR002110 GO:0005515
Adu10g00079 460 SMART ANK_2a 73 102 IPR002110 GO:0005515
Adu10g00079 460 SMART ANK_2a 106 135 IPR002110 GO:0005515
Adu10g00079 460 Pfam Ankyrin repeats (3 copies) 45 133 IPR002110 GO:0005515
Adu10g00079 460 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 442 - -
Adu10g00079 460 MobiDBLite consensus disorder prediction 17 37 - -
Adu10g00079 460 Gene3D Phosphorylase Kinase; domain 1 164 233 - -
Adu10g00079 460 Pfam Protein tyrosine and serine/threonine kinase 176 411 IPR001245 GO:0004672|GO:0006468
Adu10g00079 460 SUPERFAMILY Protein kinase-like (PK-like) 167 412 IPR011009 -
Adu10g00079 460 Gene3D - 10 149 IPR036770 -
Adu10g00079 460 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 442 - -
Adu10g00079 460 ProSiteProfiles Protein kinase domain profile. 123 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00079 Adu-Chr10 938282 942180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00079 8 432 MAP Kinase Kinase Kinase AT4G18950 66.432 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Adu10g00079 PK_Tyr_Ser-Thr 5.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00079 - - gmx:100790126 749.199