Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00058 ATGAGACTTTCTTCAGCTGGTTTTAGTCCTCCACCACAAGAAGGGGAAAAGCGAGTTCTGGACTCAGAACTTTGGCATGCATGTGCTGGTCCCCTTGTTTCTTTACCTGCAGTTGGGAGCCGTGTGGTGTACTTTCCACAAGGTCACAGTGAACAGGTGGCAGTGTCAACTAATAAGGAAGTGGATGCTCATATCCCCAACTACCCAAGCTTGCCACCCCAACTCATTTGTCAACTCCATAATCTTACTATGCATGCTGATGCTGAGACCGATGAAGTGTATGCACAGATGACCTTACAACCTTTGAATCCTCAAGAGCAAAAGGAGGCGTATCTTCCAGCAGAGTTGGGAAGTCCAAGCAAACAGCCAACAAACTACTTCTGCAAGACTTTGACAGCCAGTGACACAAGCACCCATGGAGGATTCTCTGTTCCTCGCCGAGCAGCAGAGAAAGTGTTTCCTCCATTGGATTTCTCTCAACAGCCTCCTGCTCAAGAGTTGATTGCAAGGGATTTGCATGGCAATGAATGGAAATTCAGACATATCTTTCGAGGCCAGCCTAAAAGGCATCTACTCACAACTGGATGGAGTGTTTTTGTTGGTGCTAAAAGGCTTGTTGCTGGTGATTCTGTGCTCTTTATCTGGAATGACAAGAACCAGTTGCTTCTTGGCATCCGACGCGCGAATCGACCACAAACTGTGATGCCTTCCTCAGTGTTGTCAAGTGATAGCATGCATTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACCAATAGTCGTTTCACTATTTTCTATAATCCACGTGCTAGTCCATCAGAGTTCGTCATACCTCTGGCAAAGTATGTTAAGGCTGTGTATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATGTTGTTTGAAACTGAGGAGTCCAGTGTGCGACGATATATGGGCACAATAACTGGCATTAGTGACTTGGATGCTGCTAGATGGCCAAATTCACATTGGCGCTCAGTGAAGGTTGGTTGGGATGAATCCACTGCAGGAGAGAGGCAACCTAGAGTGTCTCTTTGGGAGATTGAGCCATTAACAACATTTCCTATGTATCCATCTCCATTTCCTCTACGCCTTAAACGACCTTGGCCTCCAGGACTACCATCATTCCATGGATTGAAGGATGAAGATTTTGGTATGAGTTCTCCACTGATGTGGCTGCGAGATGCGGACAGGGGTGGTCTTCAGTCTCTAAATTTTCAGGGGATTGGAGTTAGTCCTTGGATGCAGCCGAGGTTTGATCCATCCATGCTGAATATGCAAACAGACATGTATCAAGCTGTGGCTGCGGCCGCACTTCAGGATCCTTCTAAACAGCATCCTTCTTCCTTACTTCAATTTCAGCAGCCACAGAACTTCCCAAACAGGACTGCTGCTTTAATGCATTCACAGATATTGCAGCAATCACCACCTCAGCAAGCTTTCCAAATTGATCAAGAGAATCAGTCACAAACTCCAACACATGTTCAACTGCGTCCACAGCACCAGAACTCATTCAATAACCAGCTTCACCATTACAACAACCAGCAACAGCAACAGCAACCACAGCAGATTTCCAATGCAGTGTCTACAATGTCTCAGTTTGTTTCAAGTTCAGCAACTCAGCCTCTCTCACCACCTGTGCAAGCTATCTCTTCCTTGTGCCAACAGCAAAGCTTTTCAGATTCAAATGGAAACCCTGTCACCACTGCTAATGTTTCTCCTCTGCATAGTATCTTGGGGTCCTTTCCCCAGGATGAAGCCTCTCAGCTTCTGAACCTCCCTAGAAGTAGCTCTTGGATTCCTGTTCAAACATCATCAGCAGCATGGCCGTCGAAGCGAGTTGCAGTGGATCCTCTCCTTTCTTCCGGTGCATCTCAGTGCATTCTGCCTCAGGTGGAGCTGCAGAGTAGTATTTCTCAAAATGCAGTTACATTACCACCCTTTCCTGGGAGGGAGTGCTCAATAGACCAAGAAGGAAGCACTGATCCACACAACCATCTTTTATTTGGTGCCGATTCTTCAGGCTTCCTGCATCCCTCAGAAAATATGCCCAACAAAACCTTCGTGAAGGTTTATAAGTCAGGGTCCTTCGGAAGATCACTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGCAGTGAACTAGCTCGCATGTTCGGCCTAGAAGGCGAGCTGGAGGACCCTTTGAGATCAGGCTGGCAGCTTGTATTCGTAGACCGCGAGAACGACGTTCTTCTCCTCGGCGATGGCCCCTGGCCGGAATTCGTAAATAGTGTATGGTGCATCAAGATACTATCACCGCAAGAAGTGCAGCAAATGGGAAACTCCGGCCTCGAGCTCTTGAACTCAGTTCCGGTCCAAAGGCTCTCTAACAGTATCTGCGATGACTACGGGAGCCGAGACTCCAGAAGTTTAAGCACCGGGATAACCACGGTGGGATCATTAGACTACTGA 2481 0.476 MRLSSAGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGSPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVGAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDEDFGMSSPLMWLRDADRGGLQSLNFQGIGVSPWMQPRFDPSMLNMQTDMYQAVAAAALQDPSKQHPSSLLQFQQPQNFPNRTAALMHSQILQQSPPQQAFQIDQENQSQTPTHVQLRPQHQNSFNNQLHHYNNQQQQQQPQQISNAVSTMSQFVSSSATQPLSPPVQAISSLCQQQSFSDSNGNPVTTANVSPLHSILGSFPQDEASQLLNLPRSSSWIPVQTSSAAWPSKRVAVDPLLSSGASQCILPQVELQSSISQNAVTLPPFPGRECSIDQEGSTDPHNHLLFGADSSGFLHPSENMPNKTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNSGLELLNSVPVQRLSNSICDDYGSRDSRSLSTGITTVGSLDY 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00058 826 PANTHER AUXIN RESPONSE FACTOR 1 680 - -
Adu10g00058 826 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu10g00058 826 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Adu10g00058 826 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 683 807 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu10g00058 826 SMART B3_2 127 229 IPR003340 GO:0003677
Adu10g00058 826 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 680 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu10g00058 826 Gene3D - 291 363 - -
Adu10g00058 826 PANTHER AUXIN RESPONSE FACTOR 683 807 - -
Adu10g00058 826 Pfam AUX/IAA family 691 779 IPR033389 -
Adu10g00058 826 MobiDBLite consensus disorder prediction 482 504 - -
Adu10g00058 826 SUPERFAMILY CAD & PB1 domains 687 769 - -
Adu10g00058 826 Gene3D - 690 783 - -
Adu10g00058 826 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Adu10g00058 826 ProSiteProfiles PB1 domain profile. 694 778 IPR000270 GO:0005515
Adu10g00058 826 CDD B3_DNA 126 227 IPR003340 GO:0003677
Adu10g00058 826 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Adu10g00058 826 Gene3D - 125 228 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00058 Adu-Chr10 689387 695014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00058 521 826 B3 DNA Binding Superfamily AT1G30330 53.197 3.13e-99 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu10g00058 AUX_IAA 3.9e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00058 - - gmx:100798719 1387.47