Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00043 ATGGTAGATAGTGGTTTTGGTGGTGGTCGTGATTCTGGGATGAGCTTGGAGACTGTGAATTCTGCACAGAGAACGTCCATGAGCAGTGACAGCATCTGTAGCACCAGCTTCAGCCGCGCCGGTGACATCGGCACCGTCTACCTCTGCCGCCTCCGTGACTCAGCCGCCGCCTCCGATGAGTTCCCCTCCGGTGAGTACGACAACTCCAACAGCAACGGTGACGATGAACCCGCCGGGTGCTTCTACGCGATGAAGGTGGTGGACAAAGAGGCGGTGGCGATGAAGAACAAGTCGCAGAGGGCCGAAATGGAGAGGAAGATCCTAAAGATGTTGGACCATCCGTTCCTTCCTACCCTATATGCGGAGTTTGAAGCGTCTCATTTTTCTTGCATTGTGATGGAGTTTTGTCCCGGCGGCGACCTCCACTCCCTCCGCTACAAGCAACCACAAAAACGGTTCCCTCTCTCCTCCGCAAGGTTTTACGCTGCGGAGGTACTGGTTGCTTTGGAATACCTGCACATGCTTGGAATCATCTACAGGGATCTAAAGCCCGAAAACGTGTTGACGCTCAACCCAAAGCGCCTCTTCGTGGCGGAGCCCGTCGGAGCACGCTCCTGCTCCTTCGTCGGAACTCACGAGTACGTGTCGCCAGAGGTTGCCTCCGGAAACTCCCACGGAAATGCCGTTGACTGGTGGTCTTTCGGGATATTCGTATACGAGCTCGTGTATGGTCGTACGCCGTTTGCTGGTCCATCCAACGATGTGACACTGCACAACATCATAAAGAAGCCGTTGGCGTTTCCCACAGCCACGCCCTGTAGCACGCTTGAGCACCACGCCCGGGACCTCATAAGTGGCTTGCTCCACAAGGACCCCACTCGAAGACTCGGGTCCAGGCGGGGCGCTGCTGACGTCAAAAAACACCCCTTCTTCGGCGGGATCAACCTGGCGCTCATCAGGATGCTCACTCCGCCGGAGATTCCCTATCTCAGGAGGCAAAAAACGATGCCTTCTTCGTTGTTCTCTACTACTACTAAAGGTCACAACACCATAATGAGTAATAAGCAGTTGCAAACAACGGCGTCGTTTGATTGCTTTTGA 1101 0.5486 MVDSGFGGGRDSGMSLETVNSAQRTSMSSDSICSTSFSRAGDIGTVYLCRLRDSAAASDEFPSGEYDNSNSNGDDEPAGCFYAMKVVDKEAVAMKNKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCPGGDLHSLRYKQPQKRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLTLNPKRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFVYELVYGRTPFAGPSNDVTLHNIIKKPLAFPTATPCSTLEHHARDLISGLLHKDPTRRLGSRRGAADVKKHPFFGGINLALIRMLTPPEIPYLRRQKTMPSSLFSTTTKGHNTIMSNKQLQTTASFDCF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00043 366 Gene3D Phosphorylase Kinase; domain 1 78 334 - -
Adu10g00043 366 PANTHER FLIPPASE KINASE 1-RELATED 187 366 - -
Adu10g00043 366 PANTHER FLIPPASE KINASE 1-RELATED 8 39 - -
Adu10g00043 366 SUPERFAMILY Protein kinase-like (PK-like) 40 345 IPR011009 -
Adu10g00043 366 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 187 366 - -
Adu10g00043 366 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 8 39 - -
Adu10g00043 366 PANTHER FLIPPASE KINASE 1-RELATED 40 188 - -
Adu10g00043 366 SMART serkin_6 32 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00043 366 Pfam Protein kinase domain 78 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00043 366 ProSiteProfiles Protein kinase domain profile. 32 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00043 366 Gene3D Transferase(Phosphotransferase) domain 1 140 329 - -
Adu10g00043 366 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 40 188 - -
Adu10g00043 366 MobiDBLite consensus disorder prediction 1 21 - -
Adu10g00043 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00043 Adu-Chr10 588063 589659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00043 40 366 AGC Kinase Gene Family AT2G34650 57.513 2.90e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Adu10g00043 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00043 - K08286 ccaj:109816415 428.328