Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00042 ATGCAATTGATCCCCCGTTTATTGCTGACTGTAAACTGGGTTCCATTTATTATCTTAACGTTGTGTAGTATTTTCCACTGCATGTCATTTCAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTTGTTACAAATCAACTGCATTTCCTTTCACAGGTGGATAGAATCATTTTGATCCATGAAGGTACTGTGAAAGAGGAGGGAACATTTGAGGAGCTCTCTAACCAGGGGCCATTGTTCCAAAAGCTTATGGAAAATGCTGGAAAGATGGAGGAGTATGAAGAAGAAACGGTAGATACTGAAACTGCTGATCCAAAGTCCTCTTCAAAACAGGTGGCCAATGGAGAACTTAATGATACTGCAAAGAGTGGGAGTAAGGCAAAAGAAGGAAAATCTGTCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTATGAAAGTTTTAGCAAGATACAAGACTGCATTAGGAGGTCTTTGGGTGGTTGTAATACTCTTTGGATGCTATTTCTTAACAGAAGTGTTACGAATTTCAAGTAGCACATGGTTGAGCCATTGGACTGATCAGAGTGCTTCAGTGGGCTATGATCCTGGATTTTATAATCTGATATATGCAGCTCTATCATTTGCTCAGGTTATGGTGACTTTAACAAATTCTTATTGGTTGATCATATCAAGTCTATATGCAGCCAGAAGGTTGCATGAAGCCATGCTTCACTCCATATTACAAGCTCCTATGGTTTTTTTTCATACAAATCCACTTGGAAGAGTAATCAACAGGTTTGCAAAGGATTTAGGTGACATTGATCGTAATGTTGCCCCATTTGTCAATATGTTTCTGGGTCAAGTGTCTCAGCTCCTTTCAACATTCGTCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCGATAATGCCGTTGTTGGTACTGTTTTATGGAGCATATCTCTACTATCAGAGCACCGCCCGTGAAGTAAAGCGCTTAGATTCAATTAGTAGATCCCCTGTTTATGCACAATTTGGAGAAGCACTTAATGGTCTATCAACAATTCGCGCTTACAAGGCTTATGACCGCATGGCTGATATCAACGGAAAGTCCATGGACAACAACATACGATTCACTCTGGTGAACATGAGTGGAAATCGATGGCTTGCAATTCGATTGGAAACTCTGGGAGGTCTCATGATATGGTTTACTGCAACCTTTGCGGTAATGCAGAATGGGAGGGCCGAGACTGGTGTGCTCAGGCTTGCTAGTTTGGCTGAGAATAGTCTAAATGCCGTTGAGCGTGTTGGCACTTATATAGATTTGCCTTCAGAGGCACCATCCATCATTGAGGATAGTCGCCCCCCTCCAGGCTGGCCCTCATCTGGATCAATCAGATTTGAGGATGTTGTACTTCGATACAGGCCTGAACTTCCTCCTGTCCTTCATGGCTTGAATTTCACAATTTTTCCAAGCGATAAGGTTGGCATTGTAGGAAGGACAGGAGCTGGAAAATCTAGCATGCTTAATGCTTTATTTCGAATTGTGGAATTGGAAAGAGGAAGAATATTAATTGATGATTGTGATATTGCAAAGTTTGGGCTGGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAGTCCCCTGTTTTGTTTTCAGGAACTGTAAGATTTAATCTTGACCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTCTCTGAGGCAGGCGAGAACTTCAGTGTTGGGCAGAGGCAACTGTTGAGTCTCTCTCGGGCATTATTGCGTAGATCAAAGATATTAGTACTTGACGAAGCCACTGCAGCAGTAGATGTTAGAACAGATGCCCTCATACAGAAAACAATTCGAGAGGAATTTAAATCGTGCACCATGCTCATCATTGCTCATCGTCTTAACACCATCATAGACTGTGATAGGATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAAGAACTGCTATCAAATGAAGGCAGTTCGTTCTCTAAGATGGTGCAAAGTACAGGAGCCGCAAATGCCCAATATCTACGCAGCTTAGCACTCGGGAGTAAGTCAGATAGGGAAGAGAGTAAGCATAATGATGGCCAGAAAAAATGGCTTGCTTCGTCTCGCTGGGCTGCTGCAGCTCAATTTGCCCTTGCCGTCAGTCTCACCTCATCACAGAATGACCTAAAAAGATTGGAAGTGGAAGAAGAGAATAGCATACTCAAGAAAACAAGGGATGCTGTGATAACTTTGCAGGGGGTTTTGGAAAGGAAGCATGATAGAGAAATCGAGGAATCTTTAGACCGATACCAAATATCCTCAGACAGTTGGTGGTCATCACTCCACAAGATGATTGAAGGTCTTGCAATGATGAGCAGACTGGCCAGGAGCAGGCTTCATCAATCAGACTTTGGTTTTGATGATAGATCAATTAACTTTGATCAAGTTGATATGTAG 2547 0.4268 MQLIPRLLLTVNWVPFIILTLCSIFHCMSFQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILIHEGTVKEEGTFEELSNQGPLFQKLMENAGKMEEYEEETVDTETADPKSSSKQVANGELNDTAKSGSKAKEGKSVLIKQEERETGVVSMKVLARYKTALGGLWVVVILFGCYFLTEVLRISSSTWLSHWTDQSASVGYDPGFYNLIYAALSFAQVMVTLTNSYWLIISSLYAARRLHEAMLHSILQAPMVFFHTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFVLIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTATFAVMQNGRAETGVLRLASLAENSLNAVERVGTYIDLPSEAPSIIEDSRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLNFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSLALGSKSDREESKHNDGQKKWLASSRWAAAAQFALAVSLTSSQNDLKRLEVEEENSILKKTRDAVITLQGVLERKHDREIEESLDRYQISSDSWWSSLHKMIEGLAMMSRLARSRLHQSDFGFDDRSINFDQVDM 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00042 848 CDD ABCC_MRP_domain2 465 685 - -
Adu10g00042 848 MobiDBLite consensus disorder prediction 110 127 - -
Adu10g00042 848 MobiDBLite consensus disorder prediction 97 131 - -
Adu10g00042 848 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 467 701 IPR003439 GO:0005524
Adu10g00042 848 Pfam ABC transporter 484 632 IPR003439 GO:0005524
Adu10g00042 848 SMART AAA_5 493 686 IPR003593 -
Adu10g00042 848 ProSitePatterns ABC transporters family signature. 604 618 IPR017871 GO:0005524
Adu10g00042 848 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 170 422 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g00042 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 91 IPR027417 -
Adu10g00042 848 PANTHER ABC TRANSPORTER C FAMILY MEMBER 11-RELATED 29 720 - -
Adu10g00042 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 458 693 IPR027417 -
Adu10g00042 848 SUPERFAMILY ABC transporter transmembrane region 166 447 IPR036640 GO:0005524|GO:0016021
Adu10g00042 848 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 29 720 - -
Adu10g00042 848 Gene3D - 27 118 IPR027417 -
Adu10g00042 848 CDD ABC_6TM_ABCC_D2 169 442 IPR044726 GO:0140359
Adu10g00042 848 Gene3D - 450 703 IPR027417 -
Adu10g00042 848 Gene3D ABC transporter type 1, transmembrane domain 132 448 IPR036640 GO:0005524|GO:0016021
Adu10g00042 848 Pfam ABC transporter transmembrane region 170 411 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00042 Adu-Chr10 539911 560062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00042 464 707 Calmodulin-binding Proteins AT2G36910 31.600 1.98e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00042 - - gmx:100801762 1386.32