Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00019 ATGTCGCTTTCCTGTGCCAAGAACTTCTTCCAGAGGTTCTGGATGGATGAATTCCAAATGCCAAGTCTCTCACACAGCAGCTTCTTGAACAATGACCTCTTACCATCTCTTGGAGCAAGAATAAACCAGGAAACTCGCCTTCGAAAATACATAGTTTCGCCTTTCAACCCACGTTATAGGGCTTGGGAGATGTTACTGGTTGTTCTAGTGGTTTACTCAGCCTGGATTTGTCCCTTTGAGTTCGCTTTTCTGACTTACAAGCAAGACACGCTATTCATCATAGATAACATAGTGAATGGCTTCTTCGCAGTTGACATCATCCTCACATTCTTCGTGGCATACTTAGACAGCCACTCATATCTTCTGGTTGATGATCCAAAGAAAATTGCAATCAGGTACATATCTACCTGGTTTGCCTTTGATGTATGCTCCACAGCACCCTTCCAGCCAATCACCCTCCTCTTCACAAACCACAGCAGTGAGATTGGTTTCAAAGTCCTTAACATGCTTCGATTATGGAGGCTCAGACGAGTCAGCTCTCTTTTTGCCAGACTCGAAAAGGACATTCGCTTCAACTACTTCTGGACAAGGTGCACAAAGCTTATTGCTGTAACATTGTTTGCAGTCCATTGTGCCGGCTGCTTCAACTATCTGATTGCAGATAAGTACCCGGATTCAAAGAGAACCTGGATTGGCGCCACGTACCCGGATTTCAAAGAAGAAAGCCTCTGGGACAGATATGTGACTGCAATGTACTGGTCCATTGTCACTCTTACAACCACCGGCTATGGAGATTTGCATGCAGAGAACACCAGAGAGATGCTGTTTGATATCTTCTACATGCTCTTCAACTTGGGTTTAACATCATACATCATTGGAAACATGACCAACCTAGTTGTTCACTGGACCAGCCGCACCAGAAACTTTAGAGATACAGTGAGAGCAGCCACTGAATTCGCTTCCAGAAACCATCTTCCACCACGGATACAGGATCAGATGTTGTCACACATATGCTTGAAGTTCAAGACAGAAGCATTGAAGCAGCAAGAAACTCTGAATGATCTGCCAAGGGCGATTCGTTCAAGCATTGCACACCATCTGTTCTTTCCAGTTGTGCAAAGGGTCTACCTCTTCAAAGGAGTCTCCCATGACTTCCTTTTCCAACTGGTTTCAGAAATGGAAGCCGAGTATTTCCCACCCGGGGAAGATGTGGTACTGCAAACCGAGTCGTCTACAGACTTGTACGTTCTGGTTTCAGGGGCAGTGGATCTTGTTCAATACGTGGATGGCCAAGAACAACTCTTTAGAAAAGTATTTGCAGTAGATACGTTTGGTGAGATTGGTGCGTTATATCATGTACCTCAGCCTTTCACAGTTCGGACCACAGAGCTTTCTCAAATTCTAAGACTCAACAGAACATCACTCACCAATGTTTTGCATGCAAATCCCAGAGATGCGCAGATCATAACAGATAACCTCTTCATGAGGTCAAAGGGGCATCAAGAGCCAGGCTTGGAATATCCGAGTGCGGATCCTAGATTGTTTCTTCAGAAACTGCTTCACGGAGGCAACAAAAGAGGCAGATTTTCCCGCACATGTACGGATTCTGAGGCCAATTTGCAGGATGATCAGCATTCAATCAGTGCTGAAGATGGAAAAAGAGATGATCAAGACATGGTTGAAATTCTGCTTGAGAGAGACGCAAATGCAAATACCCCAAAAGTTCCAGTGCAACAGCTCAAAAGCAAGAGCATCTCTGACCAAATAGTGACTTGTGAAAAGGAGATGAAATCTTCAGGAGAATATAGAATACAGGTTGTGGAGCCAGAAATACTTAACCTTGATAGGAATGACTCAACCATGAACAAAAGAAAAGATGCTTCTGGGTTCATGAAGAAGAGAGTCACAATCCACTTGCTAAGCGGGTGCAAAACTAACCCACAGGGACAGTACGGAAAGTTGATCATCCTTCCTGAATCATTGGAAGAGCTGCTCAACATTGCTGGTGAAAAATTTGGAGGCTTGAAACCTACAAAAGTAATTAATGAAAAGAATGCAGAGATAGACGACACAAACGTCATTAGAGATGGGGATCATCTCTTCTTTCTTTGTAGTGATAGTGAAAATTTGACATTATGA 2139 0.4376 MSLSCAKNFFQRFWMDEFQMPSLSHSSFLNNDLLPSLGARINQETRLRKYIVSPFNPRYRAWEMLLVVLVVYSAWICPFEFAFLTYKQDTLFIIDNIVNGFFAVDIILTFFVAYLDSHSYLLVDDPKKIAIRYISTWFAFDVCSTAPFQPITLLFTNHSSEIGFKVLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADKYPDSKRTWIGATYPDFKEESLWDRYVTAMYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAATEFASRNHLPPRIQDQMLSHICLKFKTEALKQQETLNDLPRAIRSSIAHHLFFPVVQRVYLFKGVSHDFLFQLVSEMEAEYFPPGEDVVLQTESSTDLYVLVSGAVDLVQYVDGQEQLFRKVFAVDTFGEIGALYHVPQPFTVRTTELSQILRLNRTSLTNVLHANPRDAQIITDNLFMRSKGHQEPGLEYPSADPRLFLQKLLHGGNKRGRFSRTCTDSEANLQDDQHSISAEDGKRDDQDMVEILLERDANANTPKVPVQQLKSKSISDQIVTCEKEMKSSGEYRIQVVEPEILNLDRNDSTMNKRKDASGFMKKRVTIHLLSGCKTNPQGQYGKLIILPESLEELLNIAGEKFGGLKPTKVINEKNAEIDDTNVIRDGDHLFFLCSDSENLTL 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00019 712 Gene3D Jelly Rolls 344 503 IPR014710 -
Adu10g00019 712 Pfam Cyclic nucleotide-binding domain 396 480 IPR000595 -
Adu10g00019 712 SUPERFAMILY cAMP-binding domain-like 304 493 IPR018490 -
Adu10g00019 712 SMART cnmp_10 377 494 IPR000595 -
Adu10g00019 712 PANTHER POTASSIUM CHANNEL AKT1 1 537 IPR045319 GO:0005249|GO:0006813
Adu10g00019 712 PANTHER POTASSIUM CHANNEL AKT1 627 711 IPR045319 GO:0005249|GO:0006813
Adu10g00019 712 PANTHER POTASSIUM CHANNEL AKT1 551 627 IPR045319 GO:0005249|GO:0006813
Adu10g00019 712 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 551 627 - -
Adu10g00019 712 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 537 - -
Adu10g00019 712 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 627 711 - -
Adu10g00019 712 CDD CAP_ED 377 489 IPR000595 -
Adu10g00019 712 ProSiteProfiles KHA domain profile. 634 712 IPR021789 -
Adu10g00019 712 Pfam KHA, dimerisation domain of potassium ion channel 633 702 IPR021789 -
Adu10g00019 712 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu10g00019 712 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu10g00019 712 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu10g00019 712 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu10g00019 712 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu10g00019 712 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Adu10g00019 712 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Adu10g00019 712 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu10g00019 712 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Adu10g00019 712 Gene3D - 60 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00019 Adu-Chr10 370173 373092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00019 1 702 Ion Channels AT5G46240 61.681 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00019 K21867 - gmx:100783528 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00019 10 370173 373092 Adu10g00019 10 370173 373092 ECH