Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03310 ATGGCCGGATCATCGTGGTTGGTAGACAAAAGTAGAATTGCAACCAAAATAAAGAGTGCATCTGGAGCAAGTGGGAAAGTTTTATGGAAAAGCAATCCTACCAGAACTTGTCCGAATTGTCAACATGTTATTGATAACAGTGATGTGGCACAAGAGTGGCCTGGATTACCAAAAGGTGTGAAATTTGATCCATCTGATCAAGAAATAATATCGCACTTGCTTGCAAAAGTTGGTGCAGCAGGTTCAGAGCCTCACCCTTTCATTGATGAATTTATTGCTACTCTTGAAGTGGATGATGGAATTTGTTATACACATCCTAAACATTTACCAGGTGTCAAGCAAGATGGTAGTGCTACACACTTTTTCCACAGATCAATCAAGGCTTATAATACCGGCAATCGAAAGCGTCGGAAAATAAATGACCAGGACTCTGGCGATGTCCGTTGGCACAAGACTGGAAAAACTAAACCTGTCATCTCGGACGGGGTTCAGAGAGGCTGTAAAAAGATTATGGTTCTATATATGACTTCAGTTAGAGGAGTAAAAGCTGAGAAAACTAACTGGGTTATGCATCAATATCACCTCGGAACAGACGAAGATGAAAAGGAAGGAGAGTATGTTATCTCTAAAGTGTTTTACCAGCAACAAGTTAAGTTTGCTGAAAAAGATGATCATGATGTTCCTGGAACCAATGAAGCAACTGTTGTGAAAGATGATCCAGTCACTTCGGAACCTCCTCATAGTGAAAAGCAATGTTCAGATCTCGACATAGGAGAAAAATCACATCAGATTCCTCAGGGTCCTCAGACAGATTGTGTAGAAGACATTCAAGCCGAGTGTGAAGAGATTGTGAAAACTGATGTAGCCATGGCAGATGCTCAAAATAATGAAGGAATGGATAATGTAGAAAATAATGCTGATGGAGAACAAAAATGGTGGGACAGTGAGTCACAGAATTTGTTAGATTCACAACAACTTGTTGAAGCATTGGCCTTGTGTGATGATCTCCTCCATAGCCAGTGTTCCAATAAGGATGATGAAAATGTAGAACACAAGGAGCACTTGAGTCTTTCCATCTATGCTCATCTAGGACCAGAGCATCTGAAGAAAGATCTTGAAGAGTGCCAAAACCTTAATCTTGATCCTGCAAACGTAGAGCTCGAGACACCACCTTCAGAGTTTCGACTAAGTCAGCTGGAATTTGGTTCACAGGATAGCTTTGTTTCCTTGAGCGGCGGCAAGGCAGTCGACTAA 1254 0.4139 MAGSSWLVDKSRIATKIKSASGASGKVLWKSNPTRTCPNCQHVIDNSDVAQEWPGLPKGVKFDPSDQEIISHLLAKVGAAGSEPHPFIDEFIATLEVDDGICYTHPKHLPGVKQDGSATHFFHRSIKAYNTGNRKRRKINDQDSGDVRWHKTGKTKPVISDGVQRGCKKIMVLYMTSVRGVKAEKTNWVMHQYHLGTDEDEKEGEYVISKVFYQQQVKFAEKDDHDVPGTNEATVVKDDPVTSEPPHSEKQCSDLDIGEKSHQIPQGPQTDCVEDIQAECEEIVKTDVAMADAQNNEGMDNVENNADGEQKWWDSESQNLLDSQQLVEALALCDDLLHSQCSNKDDENVEHKEHLSLSIYAHLGPEHLKKDLEECQNLNLDPANVELETPPSEFRLSQLEFGSQDSFVSLSGGKAVD 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03310 417 Gene3D NAC domain 65 218 IPR036093 GO:0003677|GO:0006355
Adu09g03310 417 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 409 - -
Adu09g03310 417 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 409 IPR044799 GO:0003700
Adu09g03310 417 Pfam No apical meristem (NAM) protein 57 195 IPR003441 GO:0003677|GO:0006355
Adu09g03310 417 MobiDBLite consensus disorder prediction 242 257 - -
Adu09g03310 417 MobiDBLite consensus disorder prediction 223 269 - -
Adu09g03310 417 SUPERFAMILY NAC domain 41 214 IPR036093 GO:0003677|GO:0006355
Adu09g03310 417 ProSiteProfiles NAC domain profile. 56 214 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03310 Adu-Chr9 121459118 121462982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03310 32 218 NAC Transcription Factor Family AT1G28470 57.513 4.06e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu09g03310 NAM 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03310 - - gmx:100787702 649.047