Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03281 ATGGCAACAAACAGGTTCATATGCGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTACACAGAAGAGGACACAACCTACCATGGAAGCTGAAGCAGAAGACGAACAAAGAGCCAAAGAGAAAGGTTTATCTGTGCCCCGAACCCACGTGTGTCCACCACGACCCTTCCAGGGCCTTGGGAGACCTCACTGGGATCAAGAAGCATTACTCTCGCAAGCATGGCGAGAAGAAGTGGAAGTGTGACAAGTGTTCTAAGAAATATGCTGTTCAATCCGATTGGAAGGCTCATTCTAAAACTTGCGGAACCAGAGAGTATAGATGCGATTGTGGCACTCTCTTCTCTAGACGTGACAGTTTCATCACTCATAGGGCCTTCTGTGATGCCCTAGCTCAAGAAAGTGCAAGGCACCCAAATGGCACCATGAACCCTTTGGGAGGGACACATTTGTATGCCACAAACACAAACCACATGACCTTAGGCCTCTCCCAATTAGGCACCCAAATCTCCCAATTCCAGAATCACCAAAGTGGCGCCACTCACGGCAGCGGCGGCGGCGGCATCCTCCGTCTCGGGAGCGCCGGGGCAGCCAAATTCGAGCACTTAATCCCGCCTTTAAGCCATCAGTCTTCATCATTTGGACACTCACCCCAATCATCACTCACTAATCCCTCACCTTTCTTCATCAATGACCCAAATCAAGCATTTGAAGACAACAACCAAACTCATCAACAAGCTTCTTCCCAAACAACAACAATAGCAGTGGAACCATCATCCCTGACCAATTCAATAGTAACCAACAAGGAACAACAACATCAACACTCTACGGTGACCAAGTTGGTTCAGAAAGCTGCACAAATGGGTCCAACTACCACCACCAACAATAATAATGGTTCTTCTATCCTTAGGGGAATGTGTAGTAGTTCCTCAAACAAATCCGAAAGGGAACTTGTTGTCTCTGATCATGTTGCATTTGGAAGTGATCAAAGAAGATCAAGCATGGAAAATGATCATCACCACCAGCAACACCTTCATGGGTTGATGAACTCCATTGCCAGTAATGTAGGAAACACTACTACTAGTTCCATATTTGACAATGTGCATCAAGGGAATGATGATAACAACAACAACCTCAGTCATCATCATCATCATCATCATCATCATCAGTTTCATCAGAGCCTAGAGGATTCTAGTAACACCAATAAGCTTCCTCAGAATCATCTTGGGGTCAGTTTTGGAGGGTCTGATAAGTTGACATTGGATTTTCTTGGAGTTGGAGGAATGGTAAGAAACATCAACACTGGTGCAACAACACACGCATTTTCACAAACACATAGAGAGCAACAACAACAAGGAATGATGAGTACCTTGAGTTCTTTGGATTCGGACCTGAAATCAGCACAATCAGCCACACCAAGCCACCGTTTTTGA 1440 0.4556 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPNGTMNPLGGTHLYATNTNHMTLGLSQLGTQISQFQNHQSGATHGSGGGGILRLGSAGAAKFEHLIPPLSHQSSSFGHSPQSSLTNPSPFFINDPNQAFEDNNQTHQQASSQTTTIAVEPSSLTNSIVTNKEQQHQHSTVTKLVQKAAQMGPTTTTNNNNGSSILRGMCSSSSNKSERELVVSDHVAFGSDQRRSSMENDHHHQQHLHGLMNSIASNVGNTTTSSIFDNVHQGNDDNNNNLSHHHHHHHHHQFHQSLEDSSNTNKLPQNHLGVSFGGSDKLTLDFLGVGGMVRNINTGATTHAFSQTHREQQQQGMMSTLSSLDSDLKSAQSATPSHRF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03281 479 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Adu09g03281 479 MobiDBLite consensus disorder prediction 366 414 - -
Adu09g03281 479 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 260 442 - -
Adu09g03281 479 MobiDBLite consensus disorder prediction 211 255 - -
Adu09g03281 479 SMART c2h2final6 6 28 IPR013087 -
Adu09g03281 479 SMART c2h2final6 82 102 IPR013087 -
Adu09g03281 479 SMART c2h2final6 47 77 IPR013087 -
Adu09g03281 479 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Adu09g03281 479 Gene3D Classic Zinc Finger 6 50 - -
Adu09g03281 479 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 265 - -
Adu09g03281 479 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 260 442 - -
Adu09g03281 479 MobiDBLite consensus disorder prediction 448 479 - -
Adu09g03281 479 MobiDBLite consensus disorder prediction 397 411 - -
Adu09g03281 479 SUPERFAMILY beta-beta-alpha zinc fingers 5 102 IPR036236 -
Adu09g03281 479 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 265 - -
Adu09g03281 479 Pfam Zinc-finger double-stranded RNA-binding 6 28 IPR022755 -
Adu09g03281 479 Gene3D Classic Zinc Finger 60 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03281 Adu-Chr9 121054122 121058197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03281 1 436 C2H2 Transcription Factor Family AT2G02080 45.708 3.16e-111 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu09g03281 zf-C2H2_jaz 2.8e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03281 K25870 - gmx:102663407 427.172