Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03223 ATGGACAGAACCAGAACACCAATACAAACATGCTTAGATTCTCAACTATGGCACGCCTGCGCAGGCCCCATGGTTCAAATGCCACCTCTCAACACCAAAGTCTTGTACTTCCCACAAGGCCATGCTGAACACCAACAAGCCCATGCCCATGGTCGAAAACCCCATTTTGCCCCTGCCATGAAAACCCCCATTCCACCCTTCTTCCCTTGCACACTCACCGCCATCAAATACATGGCAGAACCTGAAACCGACGAGGTCTATGTCAAGATCACCCTCACCCCTCTCCTCTCAGACCCAGAAGAACACGATCATCATTGTAGTAGTAATCATAATAGTTTCTTGGACAATAATGGTGAAAAGCCTGCTTCTTTTGCAAAGACTCTAACACAATCCGATGCCAACAATGGCGGCGGTTTCTCTGTGCCTCGTTACTGCGCCGAAACCATTTTCCCAAGGCTTGATTACTCCGCAGAGCCTCCGGTTCAGACCATAATCGCAAAAGACGTGCATGGGCAGTGTTGGAAGTTCAGACACATTTATAGAGGCACGCCAAGGAGGCACCTTTTGACTACTGGTTGGAGCAATTTCGTTAACCACAAGAAGCTTGTTGCCGGTGACTCCATTGTTTTCCTCCGAGCCCAAAATGGTGACCTTTGTGTTGGGATTAGGAGGGCCAAGAAGGGTGGCATTGCTGCTGGAACCGCCACAAATACTAATATTACTACGAATAATAATGTTGGTGAGGCTGTGAATTGTGCTGTGAATGGAAGGCCATTTGAGGTGGTGTATTATCCAAGAGGAAGCTCACCAGAGTTTTGTGTGAAGGCTTCTTCAGTGAGAGCTTCAATGCAGATTCAATGGTGTTCTGGTATGAGATTCAAGATGCCCTTTGAGACTGAAGACTCTTCCAGAATCAGTTGGTTCATGGGGACTATTTCTTCTGTCCAGCTTTCAGATCCTCTTCATTGGCCTCATTCTCCTTGGCGTCTTCTTCAGGTGGTATGGGATGAACCAGATCTACTCCAAAATGTGAAGTGTGTGAATCCTTGGTTAGTTGAACTAGTCTCAAATGTGCCAAACTTTCATCTCTCTCCATTCTCACCACCAAGGAAGAAACAAAGGTTCCTACAAGACCAACCAGATTTTCAACTCATCAACCAGATTCCAATTCCATCATCATTCTCCACCATTCAAGATCTTCAAGGCATACAGGGAGCCAGGCATGCCCATCAATTTGGGCTCGCTCCGCAAGATTTCCACATTCTTGATGGATTTCCAAGGCTTGATCATGCAGCACAACAGCCTCATAGGCCTAGTTTTGGAATCTACAACAAGAACAACTCTGCCACCACCAAGAACAATAACAATCTTGAGATATCTTGCTTGTTGAGTGTGGGAAATCCTGGCCAGAGTTTCATTAAGGAGGAGTCTTGTTCCAATGAAACAAAAGCACCACACATTTTGTTGTTTGGGAAGCTCATTCACACTGATCAGCAGAACCATTCATCAAACAGTTCAAATAGTGTTTATGAAGGAACTAATTCATCACTCAAGACATCAACTGAAAACTCTTCTGATGATGATGGAGGGTCTCCCTGGTTCAAAAATCAGCACAAGAATAATGATCTTGTTGGAACTGAAAACATTAACATATTGTGTATGGCCTTATAA 1671 0.4494 MDRTRTPIQTCLDSQLWHACAGPMVQMPPLNTKVLYFPQGHAEHQQAHAHGRKPHFAPAMKTPIPPFFPCTLTAIKYMAEPETDEVYVKITLTPLLSDPEEHDHHCSSNHNSFLDNNGEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDVHGQCWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFLRAQNGDLCVGIRRAKKGGIAAGTATNTNITTNNNVGEAVNCAVNGRPFEVVYYPRGSSPEFCVKASSVRASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQLSDPLHWPHSPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNVPNFHLSPFSPPRKKQRFLQDQPDFQLINQIPIPSSFSTIQDLQGIQGARHAHQFGLAPQDFHILDGFPRLDHAAQQPHRPSFGIYNKNNSATTKNNNNLEISCLLSVGNPGQSFIKEESCSNETKAPHILLFGKLIHTDQQNHSSNSSNSVYEGTNSSLKTSTENSSDDDGGSPWFKNQHKNNDLVGTENINILCMAL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03223 556 CDD B3_DNA 123 224 IPR003340 GO:0003677
Adu09g03223 556 SMART B3_2 124 226 IPR003340 GO:0003677
Adu09g03223 556 MobiDBLite consensus disorder prediction 499 540 - -
Adu09g03223 556 Pfam B3 DNA binding domain 124 225 IPR003340 GO:0003677
Adu09g03223 556 Pfam Auxin response factor 249 332 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu09g03223 556 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 530 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu09g03223 556 SUPERFAMILY DNA-binding pseudobarrel domain 110 224 IPR015300 -
Adu09g03223 556 PANTHER AUXIN RESPONSE FACTOR 16 9 530 - -
Adu09g03223 556 Gene3D - 286 360 - -
Adu09g03223 556 Gene3D - 122 226 IPR015300 -
Adu09g03223 556 ProSiteProfiles B3 DNA-binding domain profile. 124 226 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03223 Adu-Chr9 120250194 120252524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03223 1 543 B3 DNA Binding Superfamily AT4G30080 51.747 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu09g03223 B3 3.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03223 - - gmx:100803053 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g03223 09 120250194 120252524 Adu09g03223 09 120250194 120252524 ECH