Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03176 ATGAGAGATCAAATGCTAAGACAACATCATAGGAATCATGATAATACAAACAAAGGACTTCTTGGGAATAACAACACCAATAATGGCCTCCCTTTGATTCATTTGCTTCTCTCAACCGCCACTGCCGTCGACGGTAACAACTTCGCCGCCGCCTTGAACAACCTCACCGACCTCTACCAGAGCGTTTCCCTAACCGGTGACTCAGTGGAGCGTGTTGTGGCCTACTTCTCTGATGGCTTAACCGCAAGGCTTCTCACAAGAAACTCACCTTTCTATGACATGATCATGGAGGAACCAACTTCTGAGGAAGAGTTTCGTGCTTTCACTGATCTCTATAGAGTCTCTCCCTACTTCCAATTCGCTCATTTCACTGCCAATCAAGCAATCTTGGAGGCCTTCGAGAGGGAGGAAGATCGAAACAACCGTTCCATTCATGTCATCGATTTCGATGTCTCTTACGGCTTCCAGTGGCCTTCTCTGATACAGTCGCTATCAGAAAAGGCCACTAGTACCAGCCGTATTTTCCTAAGAGTAACTGGATTCGGGAAGAATCTGAAGGAGCTGCAAGAAACGGAGTCAAGATTAGTGAGCTTCTCTAAGGGATTTAGCAACCTAGTGTTTGAGTTTCAAGGGCTTCTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAATGAAACGGTGGCAGTGAACTTGGTATCATACTTGAACACGTTGAGTTGTTTCACGAAGATCTCAGACACATTGGGGTTTGTGCATTCACTTAGCCCCTCCATTGTTGTGTTGGTTGAGCAAGAAGGTAGCAGGACCCCAACAAGGACATTCTTGTCAAGATTCACCGACTCCTTGCACTACTTTGCAGCCATGTTCGATTCTCTCGACGATTGTCTTCCATTGGAGAGTGCTGAGAGGCTCAGGATTGAGAAGAAGCTTCTTGGGAAAGAGATCAAGAACATGCTCAACAACTATGAAAACAACAACATTGGTGATTGTGCTAAGTATGAGAGGATGGAGGCATGGAAGGCGAGGATGGAGAATCATGGTTTTGTTGGGAATAAGATTAGCTCCAAGGCCATGATTCAAGCCAAGCTACTTTTGAAGATGAGGACTCATTATTGTCCAATGCAGTTTGAAGAAGAAGATGACAGCGACGGCGGCGGCGGCGGCGGCGGTTTCAGGGTTTCGGAGAGAGATGAAGGAAGGGCTGTCTCTTTAGGGTGGCAAAATAGGTTTCTTCTTACTGTCTCAGCTTGGCAACCACTTTCTCTAATCTGA 1278 0.4624 MRDQMLRQHHRNHDNTNKGLLGNNNTNNGLPLIHLLLSTATAVDGNNFAAALNNLTDLYQSVSLTGDSVERVVAYFSDGLTARLLTRNSPFYDMIMEEPTSEEEFRAFTDLYRVSPYFQFAHFTANQAILEAFEREEDRNNRSIHVIDFDVSYGFQWPSLIQSLSEKATSTSRIFLRVTGFGKNLKELQETESRLVSFSKGFSNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFTKISDTLGFVHSLSPSIVVLVEQEGSRTPTRTFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKNMLNNYENNNIGDCAKYERMEAWKARMENHGFVGNKISSKAMIQAKLLLKMRTHYCPMQFEEEDDSDGGGGGGGFRVSERDEGRAVSLGWQNRFLLTVSAWQPLSLI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03176 425 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 420 IPR005202 -
Adu09g03176 425 Pfam GRAS domain family 32 420 IPR005202 -
Adu09g03176 425 Coils Coil 303 323 - -
Adu09g03176 425 ProSiteProfiles GRAS family profile. 23 420 IPR005202 -
Adu09g03176 425 MobiDBLite consensus disorder prediction 1 16 - -
Adu09g03176 425 MobiDBLite consensus disorder prediction 1 23 - -
Adu09g03176 425 PANTHER OSJNBA0084A10.13 PROTEIN 12 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03176 Adu-Chr9 119653055 119654468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03176 40 423 GRAS Transcription Factor Family AT3G54220 34.351 3.94e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu09g03176 GRAS 4.8e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03176 - - ahf:112776716 784.252