Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03174 ATGGATCCAAAAGGGAGCCTGTGTTCTAACAACTGGGCTAGGTCCGCTTGCTTGACCTCTCCCGGGAATGGATTGCAGACAAATATGTCATCGGATCCATCCCCTTTTTGTGGTGTTCGTGTTGAAGCGCCTTTCAAAGACTTCAACCAACCCTCTACTAACCAGTCTTTGCTTATGGCAGAGCCAAACAAGGATATTAAGATTTCTGATATAGAGAACTGTCCACTGACTGACTCATCATCGCAAACCGGTAAACTTCAAGATTGGGATCCGAATGTGATGTTAAATAACCTTTCCTTTCTGGAAGAAAAGATTCATCAGCTCCAGGGTCTTGTTCATTTGATTGATAATAAGAAGTGTCAACCTTTTGCGCAACCTGATGCGCTTGTGACACAGGAGCAGCAACTCATCACAGCTGATCTTACATCAATTATTGTTCAACTGATCTCTACTGCTGGTAGTCTTCTCCCGTCCGTTAGGCACACTCTCGCAAACACGAGTCCATTGGTCAGTCAGCTTAGCCAGCTTCGTGGCCTTAACCTTCCTTTTGGATCCGGCCCCAGTGGTGGTATTCAGCCACAAAATAATAATGTAAATAAAGTGTTTGATCAGTCCACTCAGAATGATGTACCTAATAATTGTGAACTGGAGCAAAACAACATGGAAGAGCATGAAACAAAAGATGAAGAAGATGTGGAGGAGGGAGAGAACCTTCCACCTGGTTCCTATGAGATTTTGCAGTTAGAGAAAGAAGAAATCCTTGCACCCCATACACATTTCTGTACAATTTGTGGGAAGGGATTCAAGAGGGATGCGAATCTTCGCATGCACATGCGGGGACATGGGGATGAGTACAAAACCCCGGCGGCTCTTGCAAAGCCGCATAAAGAAACCGGATCCGAACCAAAGCTCATCAAGAGGTATTCCTGTCCCTATGCCGGCTGCAAGCGAAATAAGGATCACAAGAAGTTCCAACCTTTAAAGACTATTTTATGTGTTAAAAACCACTACAAAAGGACGCATTGCGACAAGAGTTACACTTGTAGCAGATGCCACACCAAGAAGTTTTCAGTCATGGCAGACCTTAAAACTCATGAAAAGCACTGTGGTAAGGATAAATGGCTTTGTTCATGCGGTACAACATTTTCGAGGAAGGACAAGCTTTTCGGACACATTGCTCTTTTCCAAGGCCATACACCTGCAATTCCTTTGGAAGAAACTAAAGTACCGGCGGTTCCAACTGATCTTGACAGCAAAGATAACACATGTGATAAGGTTGGAAATATGAACTTCTGTTTCGGATCAAATCCTCCAAATGAAAATGAAGTTCAAAACATCATGGATGTGAAGGGTAACATTGATGATCCAATTAATTATTTCTCATCATTGAACTTTGAAGGTTGCAACTTTGGTGGGTTTAATGAATTCTCCCAGTCTCCATTTGAAGATTCAGATGCTTCTTTCTCATTTCTTATGTCTGGATCTTTTAACTATGCTCCTAAACCAGGAGGTGAATCAACTTCTGACAATCTGTAG 1536 0.4271 MDPKGSLCSNNWARSACLTSPGNGLQTNMSSDPSPFCGVRVEAPFKDFNQPSTNQSLLMAEPNKDIKISDIENCPLTDSSSQTGKLQDWDPNVMLNNLSFLEEKIHQLQGLVHLIDNKKCQPFAQPDALVTQEQQLITADLTSIIVQLISTAGSLLPSVRHTLANTSPLVSQLSQLRGLNLPFGSGPSGGIQPQNNNVNKVFDQSTQNDVPNNCELEQNNMEEHETKDEEDVEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKETGSEPKLIKRYSCPYAGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSYTCSRCHTKKFSVMADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETKVPAVPTDLDSKDNTCDKVGNMNFCFGSNPPNENEVQNIMDVKGNIDDPINYFSSLNFEGCNFGGFNEFSQSPFEDSDASFSFLMSGSFNYAPKPGGESTSDNL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03174 511 ProSiteProfiles Zinc finger C2H2 type domain profile. 259 286 IPR013087 -
Adu09g03174 511 ProSitePatterns Zinc finger C2H2 type domain signature. 261 281 IPR013087 -
Adu09g03174 511 SMART c2h2final6 308 341 IPR013087 -
Adu09g03174 511 SMART c2h2final6 346 368 IPR013087 -
Adu09g03174 511 SMART c2h2final6 259 281 IPR013087 -
Adu09g03174 511 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 1 495 IPR044300 GO:0010044|GO:0010447
Adu09g03174 511 Gene3D Classic Zinc Finger 243 313 - -
Adu09g03174 511 SUPERFAMILY beta-beta-alpha zinc fingers 257 284 IPR036236 -
Adu09g03174 511 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 1 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03174 Adu-Chr9 119638357 119641049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03174 227 509 C2H2 Transcription Factor Family AT1G34370 71.280 1.23e-142 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu09g03174 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03174 - - gmx:100170687 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g03174 09 119638357 119641049 Adu09g03174 09 119638357 119641049 ECH