Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03163 ATGACACTAACACAAATTCCTGAGAGAGCATCAATGGATATGGAATCATGTGTGCCTCCAGGATTTAGATTTCACCCAACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAAATTAACTCCCTCAAAATTGATCTAGATGTTATAGTTGAGATCGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAACAAAATGAGTGGTACTTTTTCAGCCACAAAGACAAGAAGTATCCAACAGGAACAAGAACAAACAGAGCAACTGCTGCTGGATTCTGGAAAGCAACTGGGAGAGACAAGGCTGTTATGTCCAAGAACAGGATCATTGGTATGAGGAAGACTTTGGTCTTCTACAAAGGACGTGCCCCTAATGGCCGCAAAACTGATTGGATTATGCACGAATATCGCCATCAAACCTCTGAACATGGCCCTCCTCAGGCAAAAGGATGGGTTGTGTGTAGAGCATTTCGAAAACCAAGTCCAAGTCATCAAAGGCAATTAGGGTTTGATCCATGGTGTAGTAATCATCATCATCAAGCACATTATTTCAGAGATCAAAGTAGCTATGGTGGAAGGCCCTTATCAATCACAGATCTTCTAACTTCAGAAACTCATCATCATCATCTTCTGAGTCACCCTACCGAAGGTACAAATTTTAGTCATTCCTTCGGTTCAGATCATCACCATCATCAAGAACAACAAGAGTTTGTAATATCAAATAATCATCAACAACTCATTGAGCTTCCACAGCTAGATAGCCCAACAACAACAAGTTTTGCAGTCAAAGAATCATCATCCATTAATAATAACAATGAAGAGTATTGCAGTGATGACAGGAACAACAACAACAACAACATTGATTGGAAAAGCTTGGATAACCTGTTTGCTGATACTTCTAATTACTTCTCATCAAATCCAAACATGTCCCAATTCATGACCATCAATCATCATCTAGGTTGTTTCCCTGGTTCATAA 1002 0.3972 MTLTQIPERASMDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQAKGWVVCRAFRKPSPSHQRQLGFDPWCSNHHHQAHYFRDQSSYGGRPLSITDLLTSETHHHHLLSHPTEGTNFSHSFGSDHHHHQEQQEFVISNNHQQLIELPQLDSPTTTSFAVKESSSINNNNEEYCSDDRNNNNNNIDWKSLDNLFADTSNYFSSNPNMSQFMTINHHLGCFPGS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03163 333 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Adu09g03163 333 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Adu09g03163 333 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Adu09g03163 333 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 314 - -
Adu09g03163 333 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 314 - -
Adu09g03163 333 SUPERFAMILY NAC domain 12 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03163 Adu-Chr9 119541663 119546088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03163 14 333 NAC Transcription Factor Family AT1G71930 53.936 2.48e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu09g03163 NAM 7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03163 - - gmx:100812904 461.455