Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03160 ATGCAGAAGCATAATAATCCTGCAGCAAAACCATGTTCAAAAGGCAGTAACACTGTGCTGCCACATCAAACCCCAAGATTAAGGGACCACTACCTCCTTGGGAAGAAGCTTGGTCAGGGGCAATTTGGTACAACATATCTCTGCACACAGAAATCCACAGGGAAGCTCTATGCCTGCAAATCAATCCCAAAGAGGAAGCTTCTTTGCCAAGAAGACTATGAAGATGTGTGGAGGGAGATTCAGATCATGCACCATTTGTCAGAGCATCCAAATGTGGTGCAGATTCAAGGCACCTATGAGGATTCTGTGTTTGTGCACATTGTCATGGAGCTTTGTGCAGGGGGTGAGCTCTTTGATAGGATCATACAGAAGGGGCATTACAGTGAGAGAGAGGCTGTGAAGTTGATAAAGACCATTGTTGGTGTTGTTGAGGCTTGTCACTCTCTTGGTGTCATGCATAGGGACCTCAAGCCTGAGAATTTTCTCTTTGATACGCCTAATGAAGATGCTAAGATGAAGGCCACTGATTTTGGCCTCTCTGTCTTCTACAAGCCAGGACAGTCTTTCCATGATGTAGTTGGAAGTCCCTATTATGTTGCCCCTGAGGTGTTGTGCAAGCAATATGGACCCGAAGTGGATGTATGGAGTGCTGGTGTTATCCTTTACATCTTATTGAGTGGAGTTCCACCTTTCTGGGCCGAAACCGAGTCTGGAATTTTTAAACAGATTTTACATGGGGAACTGGATTTTGTATCTGAACCGTGGCCAAGTATCTCAGAAGGTGCTCAAGATTTGGTAAAAAGGATGCTGGATAGGGACGCCAAGAAAAGAATTACGGCTCATGAAGTCTTATGCCATCCTTGGATTGCTGATGAGGAAAATGCACCTGACAAACCTTTGGATTCCGCTGTTTTGACACGGCTGAAGCATTTCTCAGCAATGAATAAACTTAAGAAGATGGCACTGCGTGTCATAGCTGAAAGACTTTCCGAGGAAGAAATAGGTGGGTTGAAGGAGCTATTTAAAATGATTGACACGGACAACAGTGGGACAATAACATTTGAGGAACTCAAGGATGGTTTGAAAGGTGTTGGCTCCAATCTCATGGAATCTGAAATTAAATCCCTCATGGAAGCGGCTGACATAGACAACAGCGGAACAATAGATTACGGCGAATTTCTTGCTGCTACACTGCACTTGAATAAGATGGAAAGAGAGGAGAATTTGGTCGCGGCTTTCGCCTACTTCGATAAAGATGGTAGTGGTTACATTACCATTGATGAGCTTCAACAGGCTTGTAAAGACTTCGGCCTAGGCGAGGTACATCTCGACGAAATGATCCAAGAGATTGATCAAGACAATGATGGGAGAATTGATTATGGGGAGTTTGTAGCTATGATGAAAAAGGGTGATCCAGATATGGGGAGGAGCAGAACCCTGAAAGGCAATTTGAACTTCAATATTGCAGATGCATTTGCAGTGAAAGAATAG 1491 0.4413 MQKHNNPAAKPCSKGSNTVLPHQTPRLRDHYLLGKKLGQGQFGTTYLCTQKSTGKLYACKSIPKRKLLCQEDYEDVWREIQIMHHLSEHPNVVQIQGTYEDSVFVHIVMELCAGGELFDRIIQKGHYSEREAVKLIKTIVGVVEACHSLGVMHRDLKPENFLFDTPNEDAKMKATDFGLSVFYKPGQSFHDVVGSPYYVAPEVLCKQYGPEVDVWSAGVILYILLSGVPPFWAETESGIFKQILHGELDFVSEPWPSISEGAQDLVKRMLDRDAKKRITAHEVLCHPWIADEENAPDKPLDSAVLTRLKHFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKDGLKGVGSNLMESEIKSLMEAADIDNSGTIDYGEFLAATLHLNKMEREENLVAAFAYFDKDGSGYITIDELQQACKDFGLGEVHLDEMIQEIDQDNDGRIDYGEFVAMMKKGDPDMGRSRTLKGNLNFNIADAFAVKE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03160 496 CDD EFh 409 468 IPR002048 GO:0005509
Adu09g03160 496 Pfam Protein kinase domain 33 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03160 496 SUPERFAMILY EF-hand 328 468 IPR011992 -
Adu09g03160 496 SMART efh_1 372 400 IPR002048 GO:0005509
Adu09g03160 496 SMART efh_1 336 364 IPR002048 GO:0005509
Adu09g03160 496 SMART efh_1 408 436 IPR002048 GO:0005509
Adu09g03160 496 SMART efh_1 442 470 IPR002048 GO:0005509
Adu09g03160 496 PANTHER BNAA09G05220D PROTEIN 18 481 - -
Adu09g03160 496 MobiDBLite consensus disorder prediction 1 22 - -
Adu09g03160 496 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Adu09g03160 496 Gene3D Phosphorylase Kinase; domain 1 32 116 - -
Adu09g03160 496 ProSiteProfiles EF-hand calcium-binding domain profile. 332 367 IPR002048 GO:0005509
Adu09g03160 496 CDD STKc_CAMK 30 288 - -
Adu09g03160 496 Pfam EF-hand domain pair 407 468 IPR002048 GO:0005509
Adu09g03160 496 Pfam EF-hand domain pair 337 397 IPR002048 GO:0005509
Adu09g03160 496 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 481 - -
Adu09g03160 496 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Adu09g03160 496 SMART serkin_6 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03160 496 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Adu09g03160 496 Gene3D - 298 471 - -
Adu09g03160 496 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
Adu09g03160 496 CDD EFh 337 396 IPR002048 GO:0005509
Adu09g03160 496 ProSiteProfiles Protein kinase domain profile. 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03160 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Adu09g03160 496 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Adu09g03160 496 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Adu09g03160 496 ProSiteProfiles EF-hand calcium-binding domain profile. 442 473 IPR002048 GO:0005509
Adu09g03160 496 SUPERFAMILY Protein kinase-like (PK-like) 10 312 IPR011009 -
Adu09g03160 496 ProSitePatterns EF-hand calcium-binding domain. 345 357 IPR018247 -
Adu09g03160 496 Gene3D Transferase(Phosphotransferase) domain 1 117 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03160 Adu-Chr9 119530029 119533471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03160 1 494 EF-hand Containing Proteins AT1G35670 81.984 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Adu09g03160 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03160 K13412 - gmx:547887 896.345