Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03159 ATGGGAGTTTCTTCACATCCTTTTTCTTCTCTTGTTTCCCTCTTTTTGAATGATCTTGAAGTACTCAATGATCCATCATATTTGTGGAGCAAGGTGAGTGTCAAGGGTAGGAGGCCAAGAACAAGAAGGGTTTTGATGAAGAGGATTGGTGGTTCTAGAAGATCAAGAGGAAGAGGAGCCAAATCCAATAATGGGATTCAGAGCAGGGTGAGAACATTGAAGAATCTTATACCAAACAGTGACAATAACATGGGTTTGGATGGACTCTTTAGAGAGACAGCAAATTATATATTGTCTTTGCAAAATAGAGTGAGAGTCATGCAGGTCATGGTTAAGGTTTTAACAGGTTCTGGTGGTGATGATGAGTGA 369 0.4011 MGVSSHPFSSLVSLFLNDLEVLNDPSYLWSKVSVKGRRPRTRRVLMKRIGGSRRSRGRGAKSNNGIQSRVRTLKNLIPNSDNNMGLDGLFRETANYILSLQNRVRVMQVMVKVLTGSGGDDE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03159 122 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 109 IPR036638 GO:0046983
Adu09g03159 122 CDD bHLH_AtIBH1_like 64 111 IPR044549 GO:0006355
Adu09g03159 122 PANTHER TRANSCRIPTION FACTOR UPBEAT1 32 116 - -
Adu09g03159 122 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 32 116 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03159 37 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 50.000 3.82e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03159 - - ccaj:109814433 112.849